| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2023 | A draft genome assembly of reef-building octocoral Heliopora coerulea | Ip, Jack Chi-Ho; Ho, Ming-Hay ; Chan, Benny K. K. ; Qiu, Jian-Wen | Scientific Data 10(1), 381 | | | |
| 2021 | A molecular census of early-life stage scleractinian corals in shallow and mesophotic zones | Derek Soto; Stéphane De Palmas; Ming-Jay Ho ; Vianney Denis; Chaolun Allen Chen | Ecology and Evolution 11(21), 14573-14584 | | | |
| 2017 | A new association between goblet worms (Entoprocta) and xeniid corals (Cnidaria) | Vianney Denis; Yu Ting Vicky Lin; Ming Jay Ho | MARINE BIODIVERSITY 49, 487-493 | | | |
| 2020 | A new species of Sessilogoga Grygier, 1990 parasitic in an antipatharian from Green Island, Taiwan, with notes on its nauplius larvae and the synapomorphies and apparent gonochorism of the genus (Crustacea: Thecostraca: Ascothoracida) | Gregory A. Kolbasov; Alexandra S. Petrunina; Jørgen Olesen; Ming-Jay Ho ; Benny K. K. Chan ; Mark J. Grygier | Marine Biodiversity 50, 43 | | | |
| 2019 | A new species of Synagoga (Crustacea, Thecostraca, Ascothoracida) parasitic in an antipatharian from Green Island, Taiwan, with notes on its morphology | Kolbasov, G. A.; Petrunina, A. S.; Ho, M.-J. ; Chan, B. K. K. | ZooKeys 876, 55-85 | | | |
| 2016 | Application of Coral Health Index in Management of Marine protected Area: An example in Kenting National Park, Taiwan | Ming-Jay Ho ; Chaolun Allen Chen | | | | |
| 2014 | Coral recruitment of a subtropical coral community at Yenliao Bay, northern Taiwan | Ming-Jay Ho ; Chang-Feng Dai | Zoological Studies 53, 5 | | | |
| 2022 | Crown-of-thorns starfish outbreak at Taiping Island (Itu Aba), Spratlys, South China Sea | Heng, Wei Khang; Ho, Ming-Jay ; Kuo, Chao-Yang; Huang, Ya-Yi; Ko, Chia-Ying; Jeng, Ming-Shiou ; Chen, Chaolun Allen | Bulletin of Marine Science 98(1), 101-102 | | | |
| 2020 | Fishing pressure occurs down to the lower mesophotic coral ecosystem in Lyudao, Taiwan | Ming-Jay Ho ; Chao-Yang Kuo; Hung-Yi Wu; Ming-Shiou Jeng ; Shiahn-Wern Shyue; Chaolun Allen Chen | Galaxea, Journal of Coral Reef Studies 22(1), 29-30 | | | |
| 2018 | Molecular assessment of Pocillopora verrucosa (Scleractinia; Pocilloporidae) distribution along a depth gradient in Ludao, Taiwan | Stephane De Palmas; Derk R. Sato; Vianney Denis; Min-Jay Ho ; Chaolun Allen Chen | PeerJ 6, e5797 | | | |
| 2023 | New depth record for oval squid, Sepioteuthis lessoniana, egg capsules in a mesophotic coral ecosystem natural habitat | Chao-Yang Kuo; Chun-Yen Lin; Ming-Jay Ho ; Chaolun Allen Chen | MARINE BIODIVERSITY 53, 68-68 | | | |
| 2018 | Outbreak of coral-killing cyanobacteriasponge, Terpios hoshinota, in Taiping Island (Itu Aba), Spratlys, South China Sea | Sung-Yin Yang; Hsing-Ju Chen; Ming-Jay Ho ; Yen-Jia Chen; Ya-Yi Huang; Wenhua Savanna Chow; Sen-Lin Tang ; Ming-Shiou Jeng ; Chaolun Allen Chen | BULLETIN OF MARINE SCIENCE 94(4), 1543-1544 | | | |
| 2023 | Potential PCR amplification bias in identifying complex ecological patterns: Higher species compositional homogeneity revealed in smaller-size coral reef zooplankton by metatranscriptomics | Mattos, FMG; Dreyer, N; Fong, CL; Wen, YHV; Jain, D; De Vivo, M; Huang, YS; Mwihaki, JK; Wang, TY ; Ho, MJ ; Tsai, IJ ; Wang, J ; Chan, BKK ; Machida, RJ | MOLECULAR ECOLOGY RESOURCES 24(3), e13911 | | | |
| 2021 | Quantifying Coral Reef Resilience to Climate Change and Human Development: An Evaluation of Multiple Empirical Frameworks | Ashley H Y Bang; Chao-Yang Kuo; Colin Kuo-Chang Wen; Khah-Leng Cherh; Ming-Jay Ho ; Nien-Yun Cheng; Yen-Chia Chen; Chaolun Allen Chen | Frontiers in Marine Science 7, 610306 | | | |
| 2021 | Scleractinian diversity in the upper mesophotic zone of Ludao (Taiwan): a museum collection with new records from Taiwanese waters | De Palmas, Stéphane; Denis, Vianney; Soto, Derek; Lin, Yuting Vicky; Ho, Ming-Jay ; Chen, Chaolun Allen | Marine Biodiversity 51, 80 | | | |
| 2018 | Spatial variation in the morphological traits of Pocillopora verrucosa along a depth gradient in Taiwan | Derek Soto; Stephane De Palmas; Ming Jay Ho ; Vianney Denis; Chaolun Allen Chen | PLoS One 13(8), e0202586 | | | |
| 2021 | Strong horizontal and vertical connectivity in the coral Pocillopora verrucosa from Ludao, Taiwan, a small oceanic island | Stéphane de Palmas; Derek Soto; Ming-Jay Ho ; Vianney Denis; Chaolun Allen Chen | PLOS ONE 16(10), e0258181 | | | |
| 2022 | Taiwan | Chao-yang Kuo; Ming-Jay Ho ; Chien-Hsun Chen; Hernyi Justin Hsieh; Ming-Shiou Jeng; Tung-Yun Fang; Chang-Feng Dai; Keryea Soong; Jiang-Shiou Huang; Chaoluan Allen Chen | Status and Trends of East Asian Coral Reefs 1983-2019 (Global Coral Reef Monitoring Net : Global Coral Reef Monitoring Network, East Asia Region) | | | |
| 2019 | Taiwan | Denis, V; Soto, D; De Palmas, S; Lin, YTV; Benayahu, Y; Huang, YM; Liu, SL; Chen, JW; Chen, Q; Sturaro, N; Ho, MJ ; Su, Y; Dai, CF; Chen, CA | Mesophotic coral ecosystems (Springer International Publishing) | | | |
| 2023 | The rhodoliths in the mesophotic coral ecosystem of Green Island, Taiwan | Ming-Jay Ho ; Shih-Wei Wang; Chao-Yang Kuo; Chaolun Allen Chen | | | | |
