| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2012 | BMP and Delta/Notch signaling control the development of amphioxus epidermal sensory neurons: insights into the evolution of the peripheral sensory system. | Lu, TM ; Luo, YJ ; Yu, JK | Development 139(11), 2020-2030 | | | |
| 2018 | Chitin-based barrier immunity and its loss predated mucus-colonization by indigenous gut microbiota. | Nakashima, K; Kimura, S; Ogawa, Y; Watanabe, S; Soma, S; Kaneko, T; Yamada, L; Sawada, H; Tung, CH; Lu, TM ; Yu, JK ; Villar-Briones, A; Kikuchi, S; Satoh, N | Nature Communications 9, 3402 | | | |
| 2017 | Constrained vertebrate evolution by pleiotropic genes. | Hu, H; Uesaka, M; Guo, S; Shimai, K; Lu, TM ; Li, F; Fujimoto, S; Ishikawa, M; Liu, S; Sasagawa, Y; Zhang, G; Kuratani, S; Yu, JK; Kusakabe, TG; Khaitovich, P; Irie, N | Nature ecology & evolution 1, 1722-1730 | | | |
| 2014 | Genome-wide survey and expression analysis of the bHLH-PAS genes in the amphioxus Branchiostoma floridae reveal both conserved and diverged expression patterns between cephalochordates and vertebrates. | Li, KL; Lu, TM ; Yu, JK | EvoDevo 5, 20 | | | |
| 2021 | Somite Compartments in Amphioxus and Its Implications on the Evolution of the Vertebrate Skeletal Tissues | Yong, Luok Wen; Lu, Tsai-Ming ; Tung, Che-Huang; Chiou, Ruei-Jen; Li, Kun-Lung; Yu, Jr-Kai | Frontiers in Cell and Developmental Biology 9, 607057 | | | |
| 2023 | Spiralian genomics and the evolution of animal genome architecture | Liao, IJY; Lu, TM ; Chen, ME; Luo, YJ | Briefings in Functional Genomics 22(6), 498-508 | | | |
| 2021 | The evolution of the metazoan Toll receptor family and its expression during protostome development | Orús-Alcalde, Andrea; Lu, Tsai-Ming ; Børve, Aina; Hejnol, Andreas | BMC Ecology and Evolution 21, 208 | | | |
| 2015 | The Nodal signaling pathway controls left-right asymmetric development in amphioxus | Soukup, V; Yong, LW; Lu, TM ; Huang, SW; Kozmik, Z; Yu, JK | EvoDevo 6, 5 | | | |
| 2021 | Xarifiid Copepods (Copepoda: Cyclopoida: Xarifiidae) Parasitic in the Coral Psammocora columna Dana, 1846 from Taiwan | Yu-Rong Cheng; Tsai-Ming Lu ; De-Sing Ding | Animals : an open access journal from MDPI 11(10), 2847 | | | |
