| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2006 | A Knowledge-based Approach to Protein Local Structure Prediction | Chen, Ching-Tai; Lin, Hsin-Nan; Wu, Kun-Pin; Sung, Ting-Yi; Hsu, Wen-Lian | | | | |
| 2006 | HYPLOSP: A Knowledge-based Approach to Protein Local Structure Prediction | Chen, Ching-Tai; Lin, Hsin-Nan; Sung, Ting-Ying; Hsu, Wen-Lian | Journal of Bioinformatics and Computational Biology 4, 1287-1307 | | | |
| 2012 | Prediction of Carbohydrate Binding Sites on Protein Surfaces with 3-Dimensional Probability Density Distributions of Interacting Atoms | Tsai, Keng-Chang; Yang, Ei-Wen; Jian, Jhih-Wei; Hsu, Po-Chiang; Peng, Hung-Pin; Chen, Ching-Tai; Chen, Jun-Bo; Chang, Jeng-Yih; Hsu, Wen-Lian; Yang, An-Suei | PLoS One 7(7), e40846 | | | |
| 2008 | Protease Substrate Site Predictors Derived from Machine Learning on Multilevel Substrate Phage Display Data | Chen, Ching-Tai; Yang, Ei-Wen; Hsu, Wen-Lian; Yang, An-Suei | Bioinformatics 24(23), 2691-2697 | | | |
| 2009 | Protein subcellular localization prediction of eukaryotes using a knowledge-based approach | Lin, Hsin-Nan; Chen, Ching-Tai; Sung, Ting-Yi; Ho, Shinn-Ying; Hsu, Wen-Lian | BMC Bioinformatics 10 | | | |
| 2012 | Protein-Protein Interaction Site Predictions with Three-Dimensional Probability Distributions of Interacting Atoms on Protein Surfaces | Chen, Ching-Tai; Peng, Hung-Pin; Jian, Jhih-Wei; Tsai, Keng-Chang; Chang, Jeng-Yih; Yang, Ei-Wen; Chen, Jun-Bo; Hsu, Wen-Lian; Yang, An-Suei | PLoS One 7(6), e37706 | | | |
| 2012 | Rationalization and Design of the Complementarity Determining Region Sequences in an Antibody-Antigen Recognition Interface | Yu, Chung-Ming; Peng, Hung-Pin; Chen, Ing-Chien; Lee, Yu-Ching; Chen, Jun-Bo; Tsai, Keng-Chang; Chen, Ching-Tai; Chang, Jeng-Yih; Yang, Ei-Wen; Hsu, Po-Chiang; Jian, Jhih-Wei; Hsu, Hung-Ju; Chang, Hung-Ju; Hsu, Wen-Lian; Huang, Kai-Fa ; Ma, Alex Che; Yang, An-Suei | PLoS One 7(3), e33340 | | | |
