| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2004 | A comparative method for identification of gene structures and alternatively spliced variants | Chuang, T. J.; Chen, F. C.; Chou, M. Y. | Bioinformatics 20, 3064-3079 | | | |
| 2006 | Alternatively and constitutively spliced exons are subject to different evolutionary forces | Chen, F. C.; Wang, S. S.; Chen, C. J.; Li, W. H.; Chuang, T. J. | Mol Biol Evol 23, 675-682 | | | |
| 2005 | ESTviewer: a web interface for visualizing mouse, rat, cattle, pig and chicken conserved ESTs in human genes and human alternatively spliced variants. | Chen, F. C.; Chuang, T. J. | Bioinformatics 21(10), 2510-2513 | | | |
| 2007 | Human-specific insertions and deletions inferred from mammalian genome sequences | Chen, F. C.; Chen, C. J.; Li, W. H. ; Chuang, T. J. | Genome Research 17(1), 16-22 | | | |
| 2006 | Identification and evolutionary analysis of novel exons and alternative splicing events using cross-species EST-to-genome comparisons in human, mouse and rat | Chen, F. C.; Chen, C. J.; Ho, J. Y.; Chuang, T. J. | BMC Bioinformatics 7, 136 | | | |
| 2006 | The effects of multiple features of alternatively spliced exons on the Ka/Ks ratio test | Chen, F. C.; Chuang, T. J. | BMC Bioinformatics 7, 259 | | | |
