| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2000 | An integrated approach to the analysis and modeling of protein sequences and structures. I. Protein structural alignment and a quantitative measure for protein structural distance | Yang, A. S.; Honig, B. | J Mol Biol 301, 665-678 | | | |
| 2000 | An integrated approach to the analysis and modeling of protein sequences and structures. II. On the relationship between sequence and structural similarity for proteins that are not obviously related in sequence | Yang, A. S.; Honig, B. | J Mol Biol 301, 679-689 | | | |
| 2000 | An integrated approach to the analysis and modeling of protein sequences and structures. III. A comparative study of sequence conservation in protein structural families using multiple structural alignments | Yang, A. S.; Honig, B. | J Mol Biol 201, 691-711 | | | |
| 1992 | Analysis of the heat capacity dependence of protein folding | Yang, A. S.; Sharp, K. A.; Honig, B. | J Mol Biol 227, 889-900 | | | |
| 1989 | Electrical potentials in trypsin isozymes | Soman, K.; Yang, A. S.; Honig, B.; Fletterick, R. | Biochemistry 28, 9918-9926 | | | |
| 1998 | Electrostatic Contributions to the Binding Free Energy of the cI Repressor to DNA | Misra, V. K.; Hecht, J. L.; Yang, A. S.; Honig, B. | Biophys J 75, 2262-2273 | | | |
| 1992 | Electrostatic effects on protein stability | Yang, A. S.; Honig, B. | Curr Opin Struct Biol 2, 40-45 | | | |
| 1995 | Free energy determinants of secondary structure formation: I. alpha-Helices | Yang, A. S.; Honig, B. | J Mol Biol 252, 351-365 | | | |
| 1995 | Free energy determinants of secondary structure formation: II. Antiparallel beta-sheets | Yang, A. S.; Honig, B. | J Mol Biol 252, 366-376 | | | |
| 1996 | Free energy determinants of secondary structure formation: III. beta-turns and their role in protein folding | Yang, A. S.; Hitz, B.; Honig, B. | J Mol Biol 259, 873-882 | | | |
| 1997 | Free Energy of Amide Hydrogen Bond Formation in Vacuum, in Water, and in Liquid Alkane Solution | BenTal, N.; Sitkoff, D.; Topol, I. A.; Yang, A. S.; Burt, S. K.; Honig, B. | J Phys Chem B 101, 450-457 | | | |
| 1993 | Macroscopic Models of Aqueous Solutions: Biological and Chemical Applications | Honig, B.; Sharp, K. A.; Yang, A. S. | J Phys Chem 97, 1101-1109 | | | |
| 1993 | On the calculation of pKas in proteins | Yang, A. S.; Gunner, M. R.; Sampogna, R.; Sharp, K.; Honig, B. | Proteins 15, 252-265 | | | |
| 1993 | On the pH Dependence of Protein Stability | Yang, A. S.; Honig, B. | J Mol Biol 231, 459-474 | | | |
| 1992 | Perturbing the polar environment of Asp102 in trypsin: consequences of replacing conserved Ser214 | McGrath, M. E.; Vasquez, J. R.; Craik, C. S.; Yang, A. S.; Honig, B.; Fletterick, R. J. | Biochemistry 31, 3059 - 3064 | | | |
| 1999 | Sequence to structure alignment in comparative modeling using PrISM | Yang, A. S.; Honig, B. | Proteins Suppl 3, 66-72 | | | |
| 1994 | Structural origins of pH and ionic strength effects on protein stability. Acid denaturation of sperm whale apomyoglobin | Yang, A. S.; Honig, B. | J Mol Biol 237, 602-614 | | | |
| 1995 | The free energy balance in protein folding | Honig, B.; Yang, A. S. | Adv Protein Chem 46, 27-58 | | | |
