| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2008 | Identification and analysis of ancestral hominoid transcriptome inferred from cross-species transcript and processed pseudogene comparisons | Huang, Yao-Ting; Chen, Feng-Chi; Chen, Chiuan-Jung; Chen, Hsin-Liang; Chuang, Trees-Juen | Genome Research 18(7), 1163-1170 | | | |
| 2012 | LDGIdb: a database of gene interactions inferred from long-range strong linkage disequilibrium between pairs of SNPs. | Wang, Ming-Chih; Chen, Feng-Chi; Chen, Yen-Zho; Huang, Yao-Ting; Chuang, Trees-Juen | BMC Research Note 5, 212 | | | |
| 2007 | Plant Gene and Alternatively Spliced Variant Annotator. A Plant Genome Annotation Pipeline for Rice Gene and Alternatively Spliced Variant Identification with Cross-Species Expressed Sequence Tag Conservation from Seven Plant Species | Chen, Feng-Chi; Wang, Sheng-Shun; Chaw, Shu-Miaw ; Huang, Yao-Ting; Chuang, Trees-Juen | Plant Physiology 143(3), 1086-1095 | | | |
