| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2007 | Analysis and Enhancement of Conditional Random Fields Gene Mention Taggers in BioCreative II Challenge Evaluation. | Chang, Yu-Ming; Kuo, Cheng-Ju; Huang, Han-Shen; Lin, Yu-Shi; Hsu, Chun-Nan | | | | |
| 2009 | BIOADI: a machine learning approach to identifying abbreviations and definitions in biological literature. | Kuo, Cheng-Ju; Ling, Maurice HT; Lin, Kuan-Ting; Hsu, Chun-Nan | BMC Bioinformatics 10, S7 | | | |
| 2007 | Exploring Match Scores to Boost Precision of Gene Normalization. | Kuo, Cheng-Ju; Chang, Yu-Ming; Huang, Han-Shen; Lin, Kuan-Ting; Yang, Bo-Hou; Lin, Yu-Shi; Hsu, Chun-Nan; Chung, I-Fang | | | | |
| 2007 | High-Recall Gene Mention Recognition by Unification of Multiple Backward Parsing Models. | Huang, Han-Shen; Lin, Yu-Shi; Lin, Kuan-Ting; Kuo, Cheng-Ju; Chang, Yu-Ming; Yang, Bo-Hou; Chung, I-Fang; Hsu, Chun-Nan | | | | |
| 2008 | Integrating high dimensional bi-directional parsing models for gene mention tagging | Hsu, Chun-Nan; Chang, Yu-Ming; Kuo, Cheng-Ju; Lin, Yu-Shi; Huang, Han-Shen; Chung, I-Feng | | | | |
| 2011 | Learning Phenotype Mapping for Integrating Large Genetic Data | Hsu, Chun-Nan; Kuo, Cheng-Ju; Cai, Congxing; Pendergrass, Sarah A.; Ritchie, Marylyn D.; Ambite, Jose Luis | | | | |
| 2007 | Rich Feature Set, Unification of Bidirectional Parsing and Dictionary Filtering for High F-Score Gene Mention Tagging. | Kuo, Cheng-Ju; Chang, Yu-Ming; Huang, Han-Shen; Lin, Kuan-Ting; Yang, Bo-Hou; Lin, Yu-Shi; Hsu, Chun-Nan; Chung, I-Fang | | | | |
| 2011 | Soft tagging of overlapping high confidence gene mention variants for cross-species full-text gene normalization | Kuo, Cheng-Ju; Ling, Maurice HT; Hsu, Chun-Nan | BMC Bioinformatics 12, S6 | | | |
| 2011 | The gene normalization task in BioCreative III | Lu, Zhiyong; Kao, Hung-Yu; Wei, Chih-Hsuan; Huang, Minlie; Liu, Jingchen; Kuo, Cheng-Ju; Hsu, Chun-Nan | BMC Bioinformatics 12, S2 | | | |
