| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2006 | A Knowledge-based Approach to Protein Local Structure Prediction | Chen, Ching-Tai; Lin, Hsin-Nan; Wu, Kun-Pin; Sung, Ting-Yi; Hsu, Wen-Lian | | | | |
| 2006 | A two-stage classifier for protein beta-turn prediction using support vector machines | Chiu, Hua-Sheng; Lin, Hsin-Nan; Lo, Allan; Sung, Ting-Yi; Hsu, Wen-Lian | | | | |
| 2005 | GANA – A Genetic Algorithm for NMR Backbone Resonance Assignment | Lin, Hsin-Nan; Wu, Kuen-Pin; Chang, Jia-Ming; Sung, Ting-Yi; Hsu, Wen-Lian | Nucleic Acids Research 33, 4593-4601 | | | |
| 2006 | HYPLOSP: A Knowledge-based Approach to Protein Local Structure Prediction | Chen, Ching-Tai; Lin, Hsin-Nan; Sung, Ting-Ying; Hsu, Wen-Lian | Journal of Bioinformatics and Computational Biology 4, 1287-1307 | | | |
| 2005 | HYPROSP II - A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence | Lin, Hsin-Nan; Chang, Jia-Ming; Wu, Kuen-Pin; Sung, Ting-Yi; Hsu, Wen-Lian | Bioinformatics 21, 3227--3233 | | | |
| 2004 | HYPROSP: A Hybrid Protein Secondary Structure Prediction Algorithm—A Knowledge-Based Approach | Wu, Kuen-Pin; Lin, Hsin-Nan; Chang, Jia-Ming; Sung, Ting-Yi; Hsu, Wen-Lian | Nucleic Acids Research 32, 5059-5065 | | | |
| 2010 | Improving protein secondary structure prediction based on short subsequences with local structure similarity | Lin, Hsin-Nan; Sung, Ting-Yi; Ho, Shinn-Ying; Hsu, Wen-Lian | BMC Genomics 11 | | | |
| 2011 | Improving the alignment quality of consistency based aligners with an evaluation function using synonymous protein words | Lin, Hsin-Nan; Notredame, Cédric; Chang, Jia-Ming; Sung, Ting-Yi; Hsu, Wen-Lian | PLoS ONE 6, e27872 | | | |
| 2009 | Protein subcellular localization prediction of eukaryotes using a knowledge-based approach | Lin, Hsin-Nan; Chen, Ching-Tai; Sung, Ting-Yi; Ho, Shinn-Ying; Hsu, Wen-Lian | BMC Bioinformatics 10 | | | |
