| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
|---|---|---|---|---|---|---|
| 2014 | A Comprehensive Functional Map of the Hepatitis C Virus Genome Provides a Resource for Probing Viral Proteins) | Roland Gilbert Remenyi; Hangfei Qi; Sheng-Yao Su; Zugen Chen; Nicholas C. Wu; Vaithilingaraja Arumugaswami; Shawna Truong; Virginia Chu; Tamar Stokelman; Hung-Hao Lo; C. Anders Olson; Ting-Ting Wu; Shu-Hwa Chen; Chung-Yen Lin; Ren Sun | mBio 5, e01469-14 | |||
| - | A Deconvolution Approach to Unveiling the Immune Microenvironment of Complex Tissues and Tumors in Transcriptomics | Shu-Hwa Chen; Bo-Yi Yu; Wen-Yu Kuo; Ya-Bo Lin; Sheng-Yao Su; Wei-Hsuan Chuang; I-Hsuan Lu; Chung-Yen Lin | BMC Bioinformatics | |||
| 2018 | A gene profiling deconvolution approach to estimating immune cell composition from complex tissues | Shu-Hwa Chen; Wen-Yu Kuo; Sheng-Yao Su; Wei-Chun Chung; Jen-Ming Ho; Henry Horng-Shing Lu; Chung-Yen Lin | BMC Bioinformatics 19, 154 | |||
| 2016 | Characterization of FN1-FGFR1 and Novel FN1-FGF1 Fusion Genes in a Large Series of Phosphaturic Mesenchymal Tumors | Jen-Chieh Lee; Sheng-Yao Su; Chun A Changou; Rong-Sen Yang; Keh-Sung Tsai; Michael T. Collins; Eric S. Orwoll; Chung-Yen Lin; Shu-Hwa Chen; Shyang-Rong Shih; Chen-Han Lee; Yoshinao Oda; Steven D. Billings; Chien-Feng Li; G. Petur Nielsen; Eiichi Konishi; Fredrik Petersson; Thomas O. Carpenter; Hsuan-Ying Huang; Andrew L. Folpe | Modern Pathology 29(11), 1335-1346 | |||
| 2020 | EpiMOLAS: an intuitive web-based framework for genome-wide DNA methylation analysis | Sheng-Yao Su; I-Hsuan Lu; Wen-Chih Cheng; Wei-Chun Chung; Pao-Yang Chen ; Jan-Ming Ho ; Shu-Hwa Chen; Chung-Yen Lin | BMC Genomics 21, 163 | |||
| 2015 | Identification of a Novel FN1-FGFR1 Genetic Fusion as a Frequent Event in Phosphaturic Mesenchymal Tumour | Jen-Chieh Lee; Yung-Ming Jeng; Sheng-Yao Su; Chen-Tu Wu; Keh-Sung Tsai; Cheng-Han Lee; Chung-Yen Lin; Jodi M. Carter; Jeng-Wen Huang; Shu-Hwa Chen; Shyang-Rong Shih; Adrián Mariño-Enríquez; Chih-Chih Chen; Andrew L. Folpe; Yih-Leong Chang; Cher-Wei Liang | The Journal of Pathology 235(4), 539-545 | |||
| 2020 | Index of Cancer-Associated Fibroblasts Is Superior to the Epithelial-Mesenchymal Transition Score in Prognosis Prediction | Ying-Chieh Ko; Ting-Yu Lai; Shu-Ching Hsu; Fu-Hui Wang; Sheng-Yao Su; Yu-Lian Chen; Min-Lung Tsai; Chung-Chun Wu; Jenn-Ren Hsiao; Jang-Yang Chang; Yi-Mi Wu; Dan R Robinson; Chung-Yen Lin ; Su-Fang Lin | Cancers 12, E1718 | |||
| 2020 | mySORT: A Web Framework by using Deconvolution Approach to Estimating Immune Cell Composition from Complex Tissues | Shu-Hwa Chen; Bo-Yi Yu; Wen-Yu Kuo; Ya-Bo Lin; Sheng-Yao Su; I-Hsuan Lu; Chung-Yen Lin | Preprint | |||
| 2017 | Systematic identification of anti-interferon function on hepatitis C virus genome reveals p7 as an immune evasion protein | Hangfei Qi; Virginia Chu; Nicholas C. Wu; Zugen Chen; Shawna Truong; Gurpreet Brar; Sheng-Yao Su; Yushen Du; Vaithilingaraja Arumugaswami; C. Anders Olson; Shu-Hua Chen; Chung-Yen Lin; Ting-Ting Wu; Ren Sun | Proceedings of the National Academy of Sciences of the United States of America (PNAS) 114(8), 2018-2023 | |||
| 2016 | TEA: the epigenome platform for Arabidopsis methylome study | Sheng-Yao Su; Shu-Hwa Chen; I-Hsuan Lu; Yih-Shien Chiang; Yu-Bin Wang; Pao-Yang Chen; Chung-Yen Lin | BMC GENOMICS 17(Suppl 13), 1027 |
