| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 2011 | Co-expression of Neighboring Genes in the Zebrafish (Danio rerio) Genome | Weng, Li-Chuan; Tsai, Huai-Kuang; Wang, Daryi | | | | |
| 2011 | Gain and Loss of Transcription Factor Binding Sites are Common between Yeast Strains but few Contribute to Expression Variation | Wang, Chuen-Yi; Tsai, Huai-Kuang; Weng, Li-Chuan; Wang, Daryi | | | | |
| 2009 | Impact of DNA-binding position variants on yeast gene expression | Swamy, Krishna B. S.; Cho, Chung-Yi; Chiang, Sufeng; Tsai, Zing Tsung-Yeh; Tsai, Huai-Kuang | Nucleic Acids Research Vol. 37, No. 21 6991–7001 | | | |
| 2013 | The Impact of Trans-Regulation on the Evolutionary Rates of Metazoan Proteins | Chen, Yi-Ching; Cheng, Jen-Hao; Tsai, Zing Tsung-Yeh; Tsai, Huai-Kuang; Chuang, Trees-Juen | NUCLEIC ACIDS RESEARCH 41(13), 6371-6380 | | | |
