Results 1-69 of 69 (Search time: 0.003 seconds).
| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link | |
|---|---|---|---|---|---|---|---|
| 1 | 2020 | GSAlign: an efficient sequence alignment tool for intra-species genomes | Hsin-Nan Lin; Wen-Lian Hsu | BMC Genomics 21, 182 | |||
| 2 | 2019 | N-GlyDE: a two-stage N-linked glycosylation site prediction incorporating gapped dipeptides and pattern-based encoding | Thejkiran Pitti; Ching-Tai Chen; Hsin-Nan Lin; Wai-Kok Choong; Wen-Lian Hsu ; Ting-Yi Sung | Scientific Reports 9, 15975 | |||
| 3 | 2018 | Hierarchical and programmable one-pot synthesis of oligosaccharides | Cheng-Wei Cheng; Yixuan Zhou; Wen-Harn Pan ; Supriya Dey; Chung-Yi Wu ; Wen-Lian Hsu ; Chi-Huey Wong | Nature Communications 9, 5202 | |||
| 4 | 2017 | Pregnant Women Recognition from Social Media for Health-related Information Exploration | Yi-Jie Huang; Chu Hsien Su; Yi-Chun Chang; Tseng-Hsin Ting; Tzu-Yuan Fu; Rou-Min Wang; Hong-Jie Dai; Yung-Chun Chang; Jitendra Jonnagaddala; Wen-Lian Hsu | The First International Workshop on Digital Disease Detection using Social Media (IJCNLP 2017) | |||
| 5 | 2017 | CIAL Valence-Arousal Analysis System at IJCNLP 2017 Shared Task: Dimensional Sentiment Analysis for Chinese Words and Phrases | Zheng-Wen Lin; Yung-Chun Chang; Chen-Ann Wang; Yu-Lun Hsieh; Wen-Lian Hsu | Dimensional Sentiment Analysis for Chinese Words (IJCNLP 2017) | |||
| 6 | 2017 | iTop-Q: an Intelligent Tool for Top-down Proteomics Quantitation Using DYAMOND Algorithm | Hui-Yin Chang; Ching-Tai Chen; Chu-Ling Ko; Yi-Ju Chen; Yu-Ju Chen ; Wen-Lian Hsu ; Chiun-Gung Juo; Ting-Yi Sung | Analytical Chemistry 89(24), 13128-13136 | |||
| 7 | 2017 | CTCPI – Convolution Tree Kernel-based Chemical-Protein Interaction Detection | Neha Warikoo; Yung-Chun Chang; Po-Ting Lai; Wen-Lian Hsu | ||||
| 8 | 2017 | CTCPI – Convolution Tree Kernel-based Chemical-Protein Interaction Detection | Neha Warikoo; Yung-Chun Chang; Po-Ting Lai; Wen-Lian Hsu | ||||
| 9 | 2017 | 02.知識饗宴「自然語言理解－人工智慧的最終關卡」 | 許聞廉 | ||||
| 10 | 2017 | Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy | Nai-Wen Chang; Hong-Jie Dai; Yung-Yu Shih; Chi-Yang Wu; Mira Anne C Dela Rosa; Rofeamor P Obena; Chen, Yu-Ju ; Wen-Lian Hsu ; Yen-Jen Oyang | Database (Oxford) 2017, bax082 | |||
| 11 | 2016 | MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification | T. Mamie Lih; Wai-Kok Choong; Chen-Chun Chen; Cheng-Wei Cheng; Hsin-Nan Lin; Ching-Tai Chen; Hui-Yin Chang; Wen-Lian Hsu ; Ting-Yi Sung | Nucleic Acids Research 44(W1), W575-580 | |||
| 12 | 2016 | iMet-Q: a user-friendly tool for metabolomics quantitation using dynamic peak-width determination | Hui-Yin Chang; Ching-Tai Chen; T. Mamie Lih; Ke-Shiuan Lynn; Chiun-Gung Juo; Wen-Lian Hsu ; Ting-Yi Sung | PLoS ONE 11(1), e0146112 | |||
| 13 | 2015 | Informatics View on the Challenges of Identifying Missing Proteins From Shotgun Proteomics | Wai-Kok Choong; Hui-Yin Chang; Ching-Tai Chen; Chia-Feng Tsai; Wen-Lian Hsu ; Ting-Yi Sung ; Yu-Ju Chen | Journal of Proteome Research 14(12), 5396-5407 | |||
| 14 | 2015 | MAGIC: An Automated N-Linked Glycoprotein Identification Tool Using a Y1-Ion Pattern Matching Algorithm and in Silico MS2 Approach | Ke-Shiuan Lynn; Chen-Chun Chen; T. Mamie Lih; Cheng-Wei Cheng; Wan-Chih Su; Chun-Hao Chang; Chia-Ying Cheng; Wen-Lian Hsu ; Yu-Ju Chen ; Ting-Yi Sung | Analytical Chemistry 87(4), 2466-2473 | |||
| 15 | 2015 | Metabolite identification for mass spectrometry-based metabolomics using multiple types of correlated ion information. | Lynn, KS; Cheng, ML; Chen, YR ; Hsu, C; Chen, A; Lih, TM; Chang, HY; Huang, CJ; Shiao, MS; Pan, WH ; Sung, TY ; Hsu, WL | Analytical chemistry 87(4), 2143-2151 | |||
| 16 | 2014 | CloudDOE: A User-Friendly Tool for Deploying Hadoop Clouds and Analyzing High-Throughput Sequencing Data with MapReduce | Wei-Chun Chung; Chien-Chih Chen; Jan-Ming Ho ; Chung-Yen Lin ; Wen-Lian Hsu ; Yu-Chun Wang; Der-Tsai Lee ; Feipei Lai; Chih-Wei Huang; Yu-Jung Chang | PLoS One 9(6):e98146 | |||
| 17 | 2011 | Phosphoproteomics identifies oncogenic Ras signaling targets and their involvement in lung adenocarcinomas. | Sudhir, P. -R.; Hsu, C. -L.; Wang, Y. -T.; Chen, Y. -J. ; Sung, T. -Y. ; Hsu, W. -L. ; Yang, U. -C.; Chen, J. -Y. | PLoS One 6(5), e20199 | |||
| 18 | 2010 | An Informatics-assisted Label-free Quantitation Strategy that Depicts Phosphoproteomic Profiles in Lung Cancer Cell Invasion | Wang, Yi-Ting; Tsai, Chia-Feng; Hong, Tzu-Chan; Tsou, Chih-Chiang; Lin, Pei-Yi; Pan, Szu-Hua; Hong, Tse-Ming; Yang, Pan-Chyr; Sung, Ting-Yi ; Hsu, Wen-Lian ; Chen, Yu-Ju | JOURNAL OF PROTEOME RESEARCH 9(11), 5582-5597 | |||
| 19 | 2010 | New Challenges for Biological Text-Mining in the Next Decade | Dai, Hong-Jie; Chang, Yen-Ching; Tsai, Richard Tzong-Han; Hsu, Wen-Lian | Computer Science and Technology 25(1), 169- | |||
| 20 | 2010 | IDEAL-Q: An automated tool for label-free quantitation analysis using an efficient peptide alignment approach and spectral data validation | Tsou, Chih-Chiang; Tsai, Chia-Feng; Tsui, Ying-Hao; Sudhir, Putty-Reddy; Wang, Yi-Ting; Chen, Yu-Ju ; Chen, Jeou-Yuan ; Sung, Ting-Yi ; Hsu, Wen-Lian | Molecular and Cellular Proteomics 9(1), 131-144 | |||
| 21 | 2009 | HypertenGene: extracting key hypertension genes from biomedical literature with position and automatically-generated template features. | Tsai, RT; Lai, PT; Dai, HJ; Huang, CH; Bow, YY; Chang, YC; Pan, WH ; Hsu, WL | BMC Bioinformatics 10(Suppl 15), S9 | |||
| 22 | 2009 | Using Contextual Information to Clarify Gene Normalization Ambiguity | Po-Ting Lai; Yue-Yang Bow; Chi-Hsin Huang; Hong-Jie Dai; Richard Tzong-Han Tsai; Wen-Lian Hsu | ||||
| 23 | 2009 | An Analysis of Research on Information Reuse and Integration | Min-Yuh Day; Chorng-Shyong Ong; Wen-Lian Hsu | ||||
| 24 | 2009 | MaXIC-Q Web: A Fully Automated Web Service Using Statistical and Computational Methods for Protein Quantitation Based on Stable Isotope Labeling and LC-MS | Tsou, Chih-Chiang; Tsui, Yin-Hao; Yian, Yi-Hwa; Chen, Yi-Ju; Yang, Han-Yin; Yu, Chuan-Yih; Lynn, Ke-Shiuan; Chen, Yu-Ju ; Sung, Ting-Yi ; Hsu, Wen-Lian | Nucleic Acids Research 37(suppl_2), W661-W669 | |||
| 25 | 2009 | Web-based pattern learning for named entity translation in Korean–Chinese cross-language information retrieval | Wang, Yu-Chun; Tsai, Richard Tzong-Han; Hsu, Wen-Lian | Expert Systems With Applications 36(2), 3990-3995 | |||
| 26 | 2008 | Predicting RNA-binding sites of proteins using support vector machines and evolutionary information | Cheng-Wei Cheng; Emily Chia-Yu Su; Jenn-Kang Hwang; Ting-Yi Sung ; Wen-Lian Hsu | BMC Bioinformatics 9(Suppl 12), S6 | |||
| 27 | 2008 | Semi-automatic conversion between biomedical predicate argument structure standards | Tsai, Richard Tzong-Han; Dai, Hong-Jie; Huang, Chi-Hsin; Hsu, Wen-Lian | BMC Bioinformatics 9, 1582-1588 | |||
| 28 | 2008 | Web taxonomy integration with hierarchical shrinkage algorithm and fine-grained relations | Chia-Wei Wu; Cheng-Wei Lee; Wen-Lian Hsu ; Richard Tzong-Han Tsai | Expert Systems with Applications 35(4), 2123-2131 | |||
| 29 | 2008 | Exploiting likely-positive and unlabeled data to improve the identification of protein-protein interaction articles | Richard Tzong-Han Tsai; Hsi-Chuan Hung; Hong-Jie Dai; Yi-Wen Lin; Wen-Lian Hsu | BMC Bioinformatics 9(Suppl 1), S3 | |||
| 30 | 2008 | Boosting Chinese Question Answering with Two Lightweight Methods: ABSPs and SCO-QAT | Lee, Cheng-Wei; Day, Min-Yuh; Sung, Cheng-Lung; Lee, Yi-Hsun; Jiang, Tian-Jian; Wu, Chia-Wei; Shih, Cheng-Wei; Chen, Yu-Ren; Hsu, Wen-Lian | ACM Transactions on Asian Language Information Processing 7, 569-578 | |||
| 31 | 2008 | Exploring Shallow Answer Ranking Features in Cross-Lingual and Monolingual Factoid Question Answering | Lee, Cheng-Wei; Lee, Yi-Hsun; Hsu, Wen-Lian | Computational Linguistics & Chinese Language Processing 13, 383-392 | |||
| 32 | 2007 | BESearch: A Supervised Learning Approach to Search for Molecular Event Participants | Tsai, Richard Tzong-Han; Dai, Hong-Jei; Hung, Hsi-Chuan; Lin, Ryan T. K.; Chou, Wen-Chi; Su, Ying-Shan; Day, Min-Yuh; Hsu, Wen-Lian | ||||
| 33 | 2007 | Exploiting Unlabeled Internal Data in Conditional Random Fields to Reduce Word Segmentation Errors for Chinese Texts | Tsai, Richard Tzong-Han; Hung, Hsi-Chuan; Dai, Hong-Jie; Hsu, Wen-Lian | ||||
| 34 | 2007 | Question Classification in English-Chinese Cross-Language Question Answering: An Integrated Genetic Algorithm and Machine Learning Approach | Day, Min-Yuh; Ong, Chorng-Shyong; Hsu, Wen-Lian | ||||
| 35 | 2007 | Chinese-Chinese and English-Chinese Question Answering with ASQA at NTCIR-6 CLQA | Lee, Cheng-Wei; Day, Min-Yuh; Sung, Cheng-Lung; Lee, Yi-Hsun; Jiang, Tian-Jian; Wu, Chia-Wei; Shih, Cheng-Wei; Chen, Yu-Ren; Hsu, Wen-Lian | ||||
| 36 | 2007 | IASL System for NTCIR-6 Korean-Chinese Cross-Language Information Retrieval | Wang, Yu-Chun; Lee, Cheng-Wei; Tsai, Richard Tzong-Han; Hsu, Wen-Lian | ||||
| 37 | 2007 | IASL Systems in the Gene Mention Tagging Task and Protein Interaction Article Sub-task | Dai, Hong-Jie; Hung, Hsieh-Chuan; Tsai, Richard Tzong-Han; Hsu, Wen-Lian | ||||
| 38 | 2007 | Reference Metadata Extraction Using a Hierarchical Knowledge Representation Framework | Day, Min-Yuh; Tsai, Richard Tzong-Han; Sung, Cheng-Lung; Hsieh, Chiu-Chen; Lee, Cheng-Wei; Wu, Shih-Hung; Wu, Kun-Pin; Ong, Chorng-Shyong; Hsu, Wen-Lian | Decision Support Systems 43, 152-167 | |||
| 39 | 2007 | Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online) | Hsu, Chun-Nan ; Lai, Jin-Mei; Liu, Chia-Hung; Tseng, Huei-Hun; Lin, Chih-Yun; Lin, Kuan-Ting; Yeh, Hsu-Hua; Sung, Ting-Yi ; Hsu, Wen-Lian ; Su, Li-Jen; Lee, Sheng-An; Chen, Chan-Han; Lee, Gen-Cher; Lee, D. T. ; Shiue, Yow-Ling; Yeh, Chang-Wei; Chang, Chao-Hui; Kao, Cheng-Yan; Huang, Chi-Ying F. | BMC Bioinformatics 8, 1471-2105 | |||
| 40 | 2006 | 02.知識饗宴「人工智慧的奧妙─從自然輸入法到生物資訊」 | 許聞廉 | ||||
| 41 | 2006 | Chinese word segmentation with minimal linguistic knowledge: An improved conditional random fields coupled with character clustering and automatically discovered template matching | Tsai, Richard Tzong-Han; Dai, Hong-Jie; Hung, Hsieh-Chuan; Sung, Cheng-Lung; Day, Min-Yuh; Hsu, Wen-Lian | ||||
| 42 | 2006 | Integrating Genetic Algorithms with Conditional Random Fields to Enhance Question Informer Prediction | Day, Min-Yuh; Lu, Chun-Hung; Ong, Chorng-Shyong; Wu, Shih-Hung; Hsu, Wen-Lian | ||||
| 43 | 2006 | On Closed Task of Chinese Word Segmentation: An Improved CRF Model Coupled with Character Clustering and Automatically Generated Template Matching | Tsai, Richard Tzong-Han; Hung, Hsieh-Chuan; Sung, Cheng-Lung; Dai, Hong-Jie; Hsu, Wen-Lian | ||||
| 44 | 2006 | On Using Ensemble Methods for Chinese Named Entity Recognition | Wu, Chia-Wei; Jan, Shyh-Yi; Tsai, Richard Tzong-Han; Hsu, Wen-Lian | ||||
| 45 | 2006 | Using Instant Messaging to Provide an Intelligent Learning Environment | Lu, Chun-Hung; Chiou, Guey-Fa; Day, Min-Yuh; Ong, Chorng-Shyong; Hsu, Wen-Lian | ||||
| 46 | 2006 | HYPLOSP: A Knowledge-based Approach to Protein Local Structure Prediction | Ching-Tai Chen; Hsin-Nan Lin; Ting-Ying Sung; Wen-Lian Hsu | Journal of Bioinformatics and Computational Biology 4(6), 1287-1307 | |||
| 47 | 2006 | RIBRA—An Error-Tolerant Algorithm for the NMR Backbone Assignment Problem | Wu, K. P; Chang, J. M.; Chen, J. B.; Chang, C. F.; Wu, W. J. ; Huang, T. H. ; Sung, T. Y. ; Hsu, W. L. | Journal of computational biology : a journal of computational molecular cell biology 13(2), 229-244 | |||
| 48 | 2005 | Learning to Integrate Web Taxonomies with Fine-Grained Relations: A Case Study Using Maximum Entropy Model | Wu, C. -W.; Tsai, T. -H.; Hsu, W. -L. | ||||
| 49 | 2005 | ASQA: Academia Sinica Question Answering System | Lee, Cheng-Wei; Shih, Cheng-Wei; Day, Min-Yuh; Tsai, Tzong-Han; Jiang, Tian-Jian; Wu, Chia-Wei; Sung, Cheng-Lung; Chen, Yu-Ren; Wu, Shih-Hung; Hsu, Wen-Lian | ||||
| 50 | 2005 | An Integrated Knowledge-based and Machine Learning Approach for Chinese Question Classification | Day, Min-Yuh; Lee, Cheng-Wei; Wu, Shih-Hung; Ong, Chorng-Shyong; Hsu, Wen-Lian | ||||
| 51 | 2005 | Applying Maximum Entropy to Robust Chinese Shallow Parsing | Wu, Shih-Hung; Shih, Cheng-Wei; Wu, Chia-Wei; Tsai, Richard Tzong-Han; Hsu, Wen-Lian | ||||
| 52 | 2005 | A Knowledge-based Approach to Citation Extraction | Day, Min-Yuh; Tsai, Richard Tzong-Han; Sung, Cheng-Lung; Lee, Cheng-Wei; Wu, Shih-Hung; Ong, Chorng-Shyong; Hsu, Wen-Lian | ||||
| 53 | 2005 | An Empirical Exploration on Using Wiki in an English as Second Language Course | Wang, Hao-Chuan; Lu, Chun-Hung; Yang, Jun-Yi; Hu, Hsin-Wen; Chiou, Guey-Fa; Chiang, Yueh-Tzu; Hsu, Wen-Lian | ||||
| 54 | 2005 | Designing an Ontology-based Intelligent Tutoring Agent with Instant Messaging | Day, Min-Yuh; Lu, Chun-Hung; Yang, Jin-Tan David; Chiou, Guey-Fa; Ong, Chorng-Shyong; Hsu, Wen-Lian | ||||
| 55 | 2005 | Exploiting full parsing information to label semantic roles using an ensemble of ME and SVM via integer linear programming | Tsai, T. -H.; Wu, C. -W.; Lin, Y. -C.; Hsu, W. -L. | ||||
| 56 | 2004 | Applying Bottom-to-Top Mapping to Chinese Shallow Parsing | Tsai, Jia-Lin; Shih, Cheng-Wei; Hsu, Wen-Lian | ||||
| 57 | 2004 | The Construction of a Chinese Named Entity Tagged Corpus: CNEC1.0 | Shih, Cheng-Wei; Tsai, Richard Tzong-Han; Wu, Shih-Hung; Hsieh, Chiu-Chen; Hsu, Wen-Lian | ||||
| 58 | 2004 | Applying Meaningful Word-Pair Identifier to the Chinese Syllable-to-Word Conversion Problem | Tsai, Jia-Lin; Chiang, Tien-Jien; Hsu, Wen-Lian | ||||
| 59 | 2004 | The Design of An Intelligent Tutoring System Based on the Ontology of Procedural Knowledge | Lu, Chun-Hung; Wu, Shih-Hung; Tu, LiongYu; Hsu, Wen-Lian | ||||
| 60 | 2004 | A Maximum Entropy Approach to Biomedical Named Entity Recognition | Hsu, Wen-Lian | ||||
| 61 | 2004 | Mencius: A Chinese Named Entity Recognizer Using Maximum Entropy-based Hybrid Model | Tsai, Richard Tzong-Han; Wu, Shih-Hung; Lee, Cheng-Wei; Shih, Cheng-Wei; Hsu, Wen-Lian | Computational Linguistics & Chinese Language Processing 9, 65-82 | |||
| 62 | 2004 | Auto-Generation of NVEF Knowledge in Chinese | Tsai, Jia-Lin; Hsieh, Gladys; Hsu, Wen-Lian | International Journal of Computational Linguistics & Chinese Language Processing 9(1), 41-46 | |||
| 63 | 2003 | A Test for the Consecutive Ones Property on Noisy Data - Application to Physical Mapping and Sequence Assembly | Lu, W. F.; Hsu, W. L. | Journal of Computational Biology 10, 709-735 | |||
| 64 | 1984 | On the maximum empty rectangle problem | Naamad, A.; Lee, D. T. ; Hsu, W. L. | Discrete Applied Mathematics 8(3), 267-277 | |||
| 65 | - | Efficient and interpretable prediction of protein functional classes by correspondence analysis and compact set relations | Chang, Jia-Ming; Taly, Jean-Francois; Erb, Ionas; Sung, Ting-Yi; Hsu, Wen-Lian ; Tang, Chuan Yi; Notredame, Cedric; Su, Emily Chia-Yu | ||||
| 66 | - | Lipid exposure prediction enhances the inference of rotational preferences of transmembrane helices | Lai, Jhih-Siang; Cheng, Cheng-Wei; Lo, Allan; Sung, Ting-Yi; Hsu, Wen-Lian | PROTEINS: Structure, Function, and Bioinformatics | |||
| 67 | - | Lipid exposure prediction enhances the inference of rotational angles of transmembrane helices | Lai, Jhih-Siang; Cheng, Cheng-Wei; Lo, Allan; Sung, Ting-Yi; Hsu, Wen-Lian | ||||
| 68 | - | Towards a Comprehensive Phosphoprotoemics View that Depicts the Mechanisms of Cancer Cell Invasion by a Label-free LC-MS/MS Strategy | Wang, Yi-Ting; Tsai, Chia-Feng; Hong, Tzu-Chan; Tsou, Chih-Chiang; Lin, Pei-Yi; Hong, Tse-Ming; Yang, Pan-Chyr; Sung, Ting-Yi; Hsu, Wen-Lian ; Chen, Yu-Ju | Molecular and Cellular Proteomics 11 | |||
| 69 | - | Comparative proteomic analysis of liver cancer stem cells | Tsai, Sheng-Ta; Shen, Chia-Ning; Tsou, Chih-Chiang; Mao, Wan-Yu; Chang, Wei-Chao; Hsu, Wen-Lian ; Chen, Chung-Hsuan | Molecular and Cellular Proteomics 13, 1410-1411 |
