Publications

Results 1-16 of 16 (Search time: 0.002 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
12023Short human eccDNAs are predictable from sequencesChang, Kai-Li; Chen, Jia-Hong; Lin, Tzu-Chieh; Leu, Jun-Yi ; Kao, Cheng-Fu ; Wong, Jin Yung; Tsai, Huai-Kuang Briefings in Bioinformatics 24(3), bbad147
22021NK cell receptor and ligand composition influences the clearance of SARS-CoV-2Hsieh, Wan-Chen; Lai, En-Yu; Liu, Yu-Ting; Wang, Yi-Fu; Tzeng, Yi-Shiuan; Cui, Lu; Lai, Yun-Ju; Huang, Hsiang-Chi; Huang, Jia-Hsin; Ni, Hung-Chih; Tsai, Dong-Yan; Liang, Jian-Jong; Liao, Chun-Che ; Lu, Ya-Ting; Jiang, Laurence; Liu, Ming-Tsan; Wang, Jann-Tay; Chang, Sui-Yuan; Chen, Chung-Yu; Tsai, Hsing-Chen; Chang, Yao-Ming ; Wernig, Gerlinde; Li, Chia-Wei ; Lin, Kuo-I ; Lin, Yi-Ling ; Tsai, Huai-Kuang ; Huang, Yen-Tsung ; Chen, Shih-Yu Journal of Clinical Investigation 131(21), e146408
32021iTARGEX analysis of yeast deletome reveals novel regulators of transcriptional buffering in S phase and protein turnoverHuang, Jia-Hsin; Liao, You-Rou; Lin, Tzu-Chieh; Tsai, Cheng-Hung; Lai, Wei-Yun; Chou, Yang-Kai; Leu, Jun-Yi ; Tsai, Huai-Kuang ; Kao, Cheng-Fu Nucleic Acids Research 49(13), 7318-7329
42019Setting Boundaries for Genome-wide Heterochromatic DNA Deletions Through Flanking Inverted Repeats in Tetrahymena thermophilaLin, C.Y.; Chao, J.L.; Tsai, H.K. ; Chalker, D.; Yao, M.C.Nucleic Acids Research 47(10), 5181-5192
52012Evolution of cis-regulatory elements in yeast de novo and duplicated new genesTsai, Z. T. Y.; Tsai, H. K. ; Cheng, J. H.; Lin, C. H.; Tsai, Y. F.; Wang, D. BMC Genomics 13, 717
62012Analysis of the association between transcription factor binding site variants and distinct accompanying regulatory motifs in yeastChiang, S. F.; Swamy, K. B. S.; Tsai, Z. T. Y.; Hsu, L. T. W.; Lu, H. H. S.; Wang, D. ; Tsai, H. K. GENE 491(2), 237-245
72012The impact of normalization and phylogenetic information on estimating the distance for metagenomes.Su, C. H.; Wang, T. Y.; Hsu, M. T.; Weng, F. C. H.; Kao, C. Y.; Wang, D. ; Tsai, H. K. IEEE-ACM Transactions on Computational Biology and Bioinformatics 9(2), 619-628
82011MetaABC—an integrated metagenomics platform for data adjustment, binning and clusteringSu, C. H.; Hsu, M. T.; Wang, T. Y.; Chiang, S. F.; Cheng, J. H.; Weng, F. C.; Kao, C. Y.; Wang, D. ; Tsai, H. K. BIOINFORMATICS 27(16), 2298-2299
92011Evidence of association between Nucleosome Occupancy and the Evolution of Transcription Factor Binding Sites in YeastSwamy, B. S. K.; Chu, W. Y.; Wang, C. Y.; Tsai, H. K. ; Wang, D. BMC Evolutionary Biology 11, 150
102010Genome-wide analysis of the cis-regulatory modules of divergent gene pairs in yeastSu, C. H.; Shih, C. H.; Chang, T. H. ; Tsai, H. K. Genomics 96(6), 352-361
112010Reanalyze unassigned reads in Sanger based metagenomic data using conserved gene adjacencyWeng, F.; Su, C. -H.; Hsu, M. -T.; Wang, T. -Y.; Tsai, H. -K. ; Wang, D. BMC Bioinformatics 11(1), 565
122009Roles of Trans and Cis Variation in Yeast Intraspecies Evolution of Gene ExpressionSung, HM; Wang, TY ; Wang, D ; Huang, YS; Wu, JP; Tsai, HK ; Tzeng, J; Huang, CJ; Lee, YC; Yang, P; Hsu, J; Chang, T; Cho, CY; Weng, LC; Lee, TC; Chang, TH ; Li, WH ; Shih, MC Molecular biology and evolution 26(11), 2533-2538
132009Co-Expression of Neighboring Genes in the Zebrafish (Danio rerio) GenomeTsai, H. K. ; Huang, P. Y.; Kao, C. U.; Wang, D. International Journal of Molecular Sciences 10(8), 3658-3670
142008Discovering gapped binding sites of yeast transcription factorsChen, CY; Tsai, HK ; Hsu, CM; Chen, MJ; Hung, HG; Huang, GT; Li, W. -H. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 105(7), 2527-2532
152007MYBS: A comprehensive web server for mining transcription factor binding sites in yeastTsai, H. K. ; Chou, M. Y.; Shih, C. H.; Huang, Grace T. W.; Chang, T. H. ; Li, W. H. Nucleic Acids Research 35(suppl_2), W221-W226
162005Statistical methods for identifying yeast cell cycle transcription factorsTsai, H. K. ; Lu, H. H. S.; Li, W. H. Proceedings of the National Academy of Sciences of the United States of America 102(38), 13532-13537