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  1. Scholars Hub of the Academia Sinica
Academia Sinica / Division of Life Sciences / Institute of Molecular Biology

Yuan, Hanna

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  • 5 wang, y. -t.
  • 5 yuan, hs
  • 4 chak, kf
  • 4 johnson, r. c.
  • 4 ko, t. p.
  • 4 liao, cc
  • 4 shyur, l. f.
  • 3 hsiao, y. -y.
  • 3 hsiao, y. y.
  • 3 hsieh, s. y.
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  • 3 2020 - 2025
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  • 53 期刊論文/journal paper

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Results 1-53 of 53 (Search time: 0.002 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
11997A novel role of ImmE7 in the autoregulatory expression of the ColE7 operon and identification of possible RNase active sites in the crystal structure of dimeric ImmE7Hsieh, S. Y.; Ko, T. P.; Tseng, M. Y.; Ku, W.; Chak, K. F.; Yuan, H. S. EMBO J. 16, 1444-1454
22009Categorizing host-dependent RNA viruses by principal component analysis of their codon usage preferencesSu, M. -W.; Lin, H. -M.; Yuan, H. S. ; Chu, W. -C.Journal of Computational Biology 16, 1539-1547
32002Characterization of the specific cleavage of ceiE7-mRNA of the bactericidal ColE7 operonChang, S. J.; Hsieh, S. Y.; Yuan, H. S. ; Chak, K. F.Biochem Biophys Res Commun 299, 613-620
41998Conversion of a beta-strand to an alpha-helix induced by a single-site mutation observed in the crystal structure of Fis mutant Pro26AlaYang, W. Z.; Ko, T. P.; Corselli, L.; Johnson, R. C.; Yuan, H. S. Protein Sci 7, 1875-1883
52021Correction to “Synergistic Inhibition of SARS-CoV-2 Replication Using Disulfiram/Ebselen and Remdesivir”Chen, T; Fei, CY; Chen, YP; Sargsyan, K; Liang, JJ; Liao, CC ; Lin, YL ; Chang, CP; Yuan, HS ; Lim, C ACS pharmacology & translational science 4(3), 1246
62021Correction: Multi-targeting of functional cysteines in multiple conserved SARS-CoV-2 domains by clinically safe Zn-ejectorsSargsyan, Karen; Lin, Chien-Chu; Chen, Ting; Grauffel, Cédric; Chen, Yi-Ping; Yang, Wei-Zen; Liang, Jian-Jong; Liao, Chun-Che ; Lin, Yi-Ling ; Yuan, Hanna S. ; Lim, Carmay Chemical Science 12(17), 6210
72006Crystal structural analysis and metal-dependent stability and activity studies of the ColE7 endonuclease domain in complex with DNA/Zn2+ or inhibitor/Ni2+Doudeva, L. G.; Huang, H.; Hsia, K. C.; Shi, Z.; Li, C. L.; Shen, Y.; Yuan, H. S. Protein Sci 15, 269-280
82003Crystal structure of a natural circularly permuted jellyroll protein: 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenesTsai, L. C.; Shyur, L. F.; Lee, S. H.; Lin, S. S.; Yuan, H. S. J Mol Biol 330, 607-620
92009Crystal structure of CRN-4: implications for domain function in apoptotic DNA degradationHsiao, Y. Y.; Nakagawa, A.; Shi, Z.; Mitani, S.; Xue, D.; Yuan, H. S. Mol Cell Biol 29, 448-457
102008Crystal structure of Escherichia coli PNPase: central channel residues are involved in processive RNA degradation.Shi, Z.; Yang, W. -Z.; Lin-Chao, S. ; Chak, K. -F.; Yuan, H. S RNA 14, 2361-2371
112012Crystal structure of human polynucleotide phosphorylase: Insights into its domain function in RNA binding and degradationLin, C. L.; Hsiao, Y. -Y.; Wang, Y. -T; Yang, W. -Z.; Yuan, H. S. Nucleic Acids Res. 40(9), 4146-4157
121999Crystallization and preliminary crystallographic analysis of the Escherichia coli tyrosine aminotransferaseKo, T. P.; Wu, S. P.; Yang, W. Z.; Tsai, H.; Yuan, H. S. Acta Crystallographica Section D-Biological Crystallography 55, 1474-1477
131995Crystallization and preliminary X-ray crystallographic analysis of ImmE7 protein of colicin E7Ku, W. Y.; Wang, C. S.; Chen, C. Y.; Chak, K. F.; Safo, M. K.; Yuan, H. S. Proteins 23, 588-590
141999Crystallization and preliminary x-ray diffraction analysis of malic enzyme from pigeon liverTsai, L. C.; Kuo, C. C.; Chou, W. Y.; Chang, G. G.; Yuan, H. S. Acta Crystallographica Section D-Biological Crystallography 55, 1930-1932
152001Crystallization and preliminary X-ray diffraction analysis of the 1,3-1,4-beta-D-glucanase from Fibrobacter succinogenesTsai, L. C.; Shyur, L. F.; Lin, S. S.; Yuan, H. S. Acta Crystallographica Section D-Biological Crystallography 57, 1303-1306
161994Determination of the absolute configuration of (S)-(+)-neopentyl-1-d alcohol by neutron diffraction study of strychnium neopentylphthalateYuan, H. S. ; Stevens, R. C.; Bau, R.; Mosher, H. S.; Koetzle, T. F.Proceedings of the National Academy of Sciences of the United States of America 91, 12872-12876
172001Directed Mutagenesis of Specific Active Site Residues onFibrobacter succinogenes1,3–1,4-β-d-Glucanase Significantly Affects Catalysis and Enzyme Structural StabilityChen, JL; Tsai, LC; Wen, TN ; Tang, JB; Yuan, HS ; Shyur, LF Journal of Biological Chemistry 276(21), 17895-17901
182003DNA binding and cleavage by the periplasmic nuclease Vvn: a novel structure with a known active siteLi, C. L.; Hor, L. I.; Chang, Z. F.; Tsai, L. C.; Yang, W. Z.; Yuan, H. S. EMBO J 22, 4014-4025
192004DNA Binding and Degradation by the HNH Protein ColE7Hsia, K. C.; Chak, K. F.; Liang, P. H. ; Cheng, Y. S.; Ku, W. Y.; Yuan, H. S. Structure 12(2), 205-214
202022Efficient strategy to design protease inhibitors: Application to enterovirus 71 2A proteaseTing Chen; Cédric Grauffel; Wei-Zen Yang; Yi-Ping Chen; Hanna S. Yuan ; Carmay Lim ACS Bio & Med Chem Au 2(4), 437-449
211999Expression, crystallization and preliminary x-ray diffraction studies of N-carbamyl-D-amino-acid amidohydrolase from Agrobacterium radiobacterHsu, W. H.; Chien, F. T.; Hsu, C. L.; Wang, T. C.; Yuan, H. S. ; Wang, W. C.Acta Crystallographica Section D-Biological Crystallography 55, 694-695
221999Hierarchical order of critical residues on the immunity-determining region of the Im7 protein which confer specific immunity to its cognate colicinLu, F. M.; Yuan, H. S. ; Hsu, Y. C.; Chang, S. J.; Chak, K. F.Biochem Biophys Res Commun 264, 69-75
232006High-resolution crystal structure of a truncated ColE7 translocation domain: implications for colicin transport across membranesCheng, Y. S.; Shi, Z.; Doudeva, L. G.; Yang, W. Z.; Chak, K. F.; Yuan, H. S. J Mol Biol 356, 22-31
242012How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexesHsiao, Y. -Y.; Duh, Y.; Chen, Y. -P.; Wang, Y. -T.; Yuan, H. S. Nucleic Acids Res 40, 8144-8154
252005Identification of an essential cleavage site in ColE7 required for importand killing of cellsShi, Z.; Chak, K. F.; Yuan, H. S. J Biol Chem 280, 24663-24668
262007Inhibition of IS2 transposition by factor for inversion stimulationLei, G. S.; Chen, C. J.; Yuan, H. S. ; Wang, S. H.; Hu, S. T.FEMS Microbiol Lett 275, 98-105
272004Involvement of colicin in the limited protection of the colicin producing cells against bacteriophageLin, YH; Liao, CC; Liang, PH ; Yuan, HS ; Chak, KFBiochemical and Biophysical Research Communications 318(1), 81-87
282002Metal ions and phosphate binding in the H-N-H motif: crystal structures of the nuclease domain of ColE7/Im7 in complex with a phosphate ion and different divalent metal ionsSui, M. J.; Tsai, L. C.; Hsia, K. C.; Doudeva, L. G.; Ku, W. Y.; Han, G. W.; Yuan, H. S. Protein Sci 11, 2947-2957
292002Mutagenesis of Trp(54) and Trp(203) residues on Fibrobacter succinogenes 1,3-1,4-beta-D-glucanase significantly affects catalytic activities of the enzymeCheng, H. L.; Tsai, L. C.; Lin, S. S.; Yuan, H. S. ; Yang, N. S.; Lee, S. H.; Shyur, L. F.Biochemistry 41, 8759-8766
302001Processing of DNase domain during translocation of colicin E7 across the membrane of Escherichia coliLiao, CC; Hsiao, KC; Liu, YW; Leng, PH ; Yuen, HS ; Chak, KFBiochemical and Biophysical Research Communications 284(3), 556-562
311999Quantitative phase determination for macromolecular crystals using stereoscopic multibeam imagingChang, S. L.; Chao, C. H.; Huang, Y. S.; Jean, Y. C.; Sheu, H. S.; Liang, F. J.; Chien, H. C.; Chen, C. K.; Yuan, H. S. Acta Crystallogr A 55, 933-938
322012Recombination in the non-structural gene region in type-2 dengue virusesSu, M. W.; Yuan, H. S. ; Chu, W. C.Intervirology 55(3), 225-230
332009Redesign of high-affinity nonspecific nucleases with altered sequence preferenceWang, Y. -T.; Wright, J. D.; Doudeva, L. G.; Chen, H. -C.; Lim, C.; Yuan, H. S. J Am Chem Soc 131, 17345-17353
342005Stabilization and enhancement of the antiapoptotic activity of mcl-1 by TCTPLiu, H.; Peng, H. W.; Cheng, Y. S.; Yuan, H. S. ; Yang-Yen, H. F. Molecular and Cellular Biology 25(8), 3117-3126
352000Structural analysis of the transcriptional activation on Fis: crystal structures of six Fis mutants with different activation propertiesCheng, Y. S.; Yang, W. Z.; Johnson, R. C.; Yuan, H. S. J Mol Biol 302, 1139-1151
362010Structural and biochemical characterization of CRN-5 and Rrp46: an exosome component participating in apoptotic DNA degradationYang, C. -C; Wang, Y. -T.; Hsiao, Y. Y.; Doudeva, L. G.; Kuo, P. -H.; Chow, S. Y.; Yuan, H. S. RNA 16, 1748-1759
372009Structural and catalytic roles of residues located in beta13 strand and the following beta-turn loop in Fibrobacter succinogenes 1,3-1,4-beta-D-glucanaseLin, Y. S.; Tsai, L. C.; Lee, S. H.; Yuan, H. S. ; Shyur, L. F.Biochimica et Biophysica Acta-General Subjects 1790, 231-239
382005Structural and functional insight into sugar-nonspecific nucleases in host defenseHsia, K. C.; Li, C. L.; Yuan, H. S. Curr Opin Struct Biol 15, 126-134
392008Structural and functional insights into human Tudor-SN, a key component linking RNA interference and editingLi, C. L.; Yang, W. Z.; Chen, Y. P.; Yuan, H. S. Nucleic Acids Research 36, 3579-3589
402011Structural basis for RNA trimming by RNase T in stable RNA 3'-end maturationHsiao, Y. -Y.; Yang, C. -C; Lin, C. L.; Lin, J. L. J.; Duh, Y.; Yuan, H. S. Nature Chemical Biology 7(4), 236-243
412007Structural basis for sequence-dependent DNA cleavage by nonspecific endonucleasesWang, Y. T.; Yang, W. J.; Li, C. L.; Doudeva, L. C.; Yuan, H. S. Nucleic Acids Research 35, 584-594
422001Structural basis of non-specific lipid binding in maize lipid-transfer protein complexes revealed by high-resolution X-ray crystallographyHan, G. W.; Lee, J. Y.; Song, H. K.; Chang, C.; Min, K.; Moon, J.; Shin, D. H.; Kopka, M. L.; Sawaya, M. R.; Yuan, H. S. ; Kim, T. D.; Choe, J.; Lim, D.; Moon, H. J.; Suh, S. W.J Mol Biol 308, 263-278
432012Structural insights into DNA binding and cleavage by CPS-6 from Caenorhabditis elegansLin, J. L. J.; Lin, C. L.; Hsiao, Y. Y.; Doudeva, L. G.; Yang, W. -Z.; Wang, Y. -T.; Yuan, H. S. Journal of Biological Chemistry 287, 7110-7120
442009Structural insights into TDP-43 in nucleic-acid binding and domain interactionsKuo, P H; Doudeva, L. G.; Wang, Y. -T.; Shen, C. -K. J. ; Yuan, H. S. Nucleic Acids Research 37(6), 1799-1808
452002Structural studies of the pigeon cytosolic NADP(+)-dependent malic enzymeYang, Z.; Zhang, H.; Hung, H. C.; Kuo, C. C.; Tsai, L. C.; Yuan, H. S. ; Chou, W. Y.; Chang, G. G.; Tong, L.Protein Sci 11, 332-341
462007The Conserved Asparagine in the HNH Motif Serves an Important Structural Role in Metal Finger EndonucleasesHuang, H.; Yuan, H. S. Journal of Molecular Biology 368(3), 812-821
472006The critical roles of polyamines in regulating ColE7 production and restricting ColE7 uptake of the colicin producing Escherichia coliPan, YH; Liao, CC; Kuo, CC; Duan, KJ; Liang, PH ; Yuan, HS ; Hu, ST; Chak, KFJournal of Biological Chemistry 281(19), 13083-13091
481999The crystal structure of the DNase domain of colicin E7 in complex with its inhibitor Im7 proteinKo, T. P.; Liao, C. C.; Ku, W. Y.; Chak, K. F.; Yuan, H. S. Structure 15, 91-102
491996The crystal structure of the immunity protein of colicin E7 suggests a possible colicin-interacting surfaceChak, K. F.; Safo, M. K.; Ku, W. Y.; Hsieh, S. Y.; Yuan, H. S. Proceedings of the National Academy of Sciences of the United States of America 93, 6437-6442
502002The crystal structure of the nuclease domain of colicin E7 suggests a mechanism for binding to double-stranded DNA by the H-N-H endonucleasesCheng, Y. S.; Hsia, K. C.; Doudeva, L. G.; Chak, K. F.; Yuan, H. S. J Mol Biol 324, 227-236
511994The structure of Fis mutant Pro61Ala illustrates that the kink within the long alpha-helix is not due to the presence of the proline residueYuan, H. S. ; Wang, S. S.; Yang, W. Z.; Finkel, S. E.; Johnson, R. C.J Biol Chem 269, 28947-28954
521997The transactivation region of the fis protein that controls site-specific DNA inversion contains extended mobile beta-hairpin armsSafo, M. K.; Yang, W. Z.; Corselli, L.; Cramton, S. E.; Yuan, H. S. ; Johnson, R. C.EMBO J 16, 6860-6873
532002The zinc ion in the HNH motif of the endonuclease domain of colicin E7 is not required for DNA binding but is essential for DNA hydrolysisKu, WY; Liu, YW; Hsu, YC; Liao, CC; Liang, PH ; Yuan, HS ; Chak, KFNucleic Acids Research 30(7), 1670-1678

 

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