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  1. Scholars Hub of the Academia Sinica
Academia Sinica / Division of Life Sciences / Agricultural Biotechnology Research Center

Shih, Ming-Che

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  • 49 shih, mc
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Results 1-75 of 75 (Search time: 0.001 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
12012A highly efficient β-glucosidase from the buffalo rumen fungus Neocallimastix patriciarum W5Chen, H. -L.; Chen, Y. -C.; Lu, M. -Y.; Chang, J. -J.; Wang, H. -T.; Ke, H. -M.; Wang, T. -Y.; Ruan, S. -K.; Wang, T. -Y. ; Hong, K. -Y.; Cho, H. -Y.; Lin, W. -T.; Shih, M. -C. ; Li, W. -H. Biotechnology for Biofuels 5, 24
22006An extracellular exo-beta-(1,3)-glucanase from Pichia pastoris: purification, characterization, molecular cloning, and functional expression.Xu, Z; Shih, MC ; Poulton, JEProtein expression and purification 47(1), 118-127
32019Analysis of genetic diversity of Xanthomonas oryzae pv. oryzae populations in Taiwan.Chien, CC; Chou, MY; Chen, CY; Shih, MC Scientific reports 9(1), 316
42006Arabidopsis thaliana beta-Glucosidases BGLU45 and BGLU46 hydrolyse monolignol glucosides.Escamilla-Trevino, LL; Chen, W; Card, ML; Shih, MC ; Cheng, CL; Poulton, JEPhytochemistry 67(15), 1651-60
52013Assembling a cellulase cocktail and a cellodextrin transporter into a yeast host for CBP ethanol production.Chang, JJ; Ho, FJ; Ho, CY; Wu, YC; Hou, YH; Huang, CC; Shih, MC ; Li, WHBiotechnology for biofuels 6(1), 19
62012Assembly of multiple cellulases in a yeast host for cellulosic ethanol productionChang, J. -J.; Ho, C-Y.; Huang, Ho F-J; Tsai, T-Y; Ke, H-M; Wang, C. H. -T.; Chen, H-L.; Huang, C. -C.; Shih, M-C ; Li, W. -H.Biotechnology for Biofuels  
72020Blue Light Acclimation Reduces the Photoinhibition of Phalaenopsis aphrodite (Moth Orchid)Ko, S-S ; Jhong, C-M; Shih, M-C International Journal of Molecular Sciences 21(17), 6167
82020Blue Light Mediates Chloroplast Avoidance and Enhances Photoprotection of Vanilla OrchidKo, Swee-Suak ; Jhong, Chung-Min; Lin, Yi-Jyun; Wei, Ching-Yu; Lee, Ju-Yin; Shih, Ming-Che International Journal of Molecular Sciences 21(21), 8022
92021CaNRT2.1 is required for nitrate but not nitrite uptake in chili pepper pathogen Colletotrichum acutatumKuo, C.-C.; Lin, Y.-C.; Chen, L.-H.; Lin, M.-Y.; Shih, M.-C. ; Lee, M.-H.Frontiers in Microbiology 11, 613674
101994Characterization of cis-acting elements in light regulation of the nuclear gene encoding the A subunit of chloroplast isozymes of glyceraldehyde-3-phosphate dehydrogenase from Arabidopsis thaliana.Conley, TR; Park, SC; Kwon, HB; Peng, HP; Shih, MC Molecular and cellular biology 14(4), 2525-2533
112018Chromosome-level assembly, genetic and physical mapping of Phalaenopsis aphrodite genome provides new insights into species adaptation and resources for orchid breeding.Chao, YT; Chen, WC; Chen, CY; Ho, HY; Yeh, CH; Kuo, YT; Su, CL; Yen, SH; Hsueh, HY; Yeh, JH; Hsu, HL; Tsai, YH; Kuo, TY; Chang, SB; Chen, KY; Shih, MC Plant biotechnology journal 16(12), 2027-2041
121996Cis-acting elements essential for light regulation of the nuclear gene encoding the A subunit of chloroplast glyceraldehyde 3-phosphate dehydrogenase in Arabidopsis thaliana.Park, SC; Kwon, HB; Shih, MC Plant physiology 112(4), 1563-1571
131991Cloning and chromosomal mapping of nuclear genes encoding chloroplast and cytosolic glyceraldehyde-3-phosphate-dehydrogenase from Arabidopsis thaliana.Shih, MC ; Heinrich, P; Goodman, HMGene 104(2), 133-138
141994Cloning and sequencing of a cDNA clone encoding the cytosolic triose-phosphate isomerase from Arabidopsis thaliana.Shih, MC Plant physiology 104(3), 1103-1104
152002Collaborative Project on the Functional Genomics of the Arabidopsis beta-Glucosidase and beta-Galactosidase Gene Families.Esen, A.; Poulton, J. E.; Shih, M.-C. ; Cheng, C.-L.; Bevan, D. R.; Winkel-Shirley, B.; Mohamed, A.; Henrissat, B.; B. L. MøllerPlant Physiol. 129, 406-407
162022Comparative genomics of three Colletotrichum scovillei strains and genetic analysis revealed genes involved in fungal growth and virulence on chili pepperHsieh, D.-K.; Chuang, S.-C.; Chen, C.-Y.; Chao, Y.-T.; Lu, M.-Y.; Lee, M.-H.; Shih, M.-C. Frontiers in Microbiology 13, 818291
172011De novo Assembly of Expressed Transcripts and Global Analysis of Phalaenopsis aphrodite Transcriptome.Su, CL; Chao, YT; Chang, YCA; Chen, WC; Chen, CY; Lee, AY; Hwa, KT; Shih, MC Plant & Cell Physiology 52, 1501–1514
182012Development of cellulosic ethanol production process vis co-culturing of artificial cellulosomal Bacillus and kefir yeast.Ho, C-Y.; Chang, J. -J.; Lee, S. -C.; Chin, T-. Y.; Shih, M. -C. ; Li, W. -H.; Huang, C. -C.Applied Energy 100, 27-32
191983Differential effects of mutations on discrete steps in transcription initiation at the lambda PRE promoter.Shih, MC ; Gussin, GNCell 34(3), 941-949
202005Differential expression of genes encoding 1-aminocyclopropane-1-carboxylate synthase in Arabidopsis during hypoxia.Peng, HP; Lin, TY; Wang, NN; Shih, MC Plant molecular biology 58(1), 15-25
211988Differential light regulated expression of nuclear genes encoding chloroplast and cytosolic glyceraldehyde-3-phosphate dehydrogenase in Nicotiana tabacum.Shih, MC ; Goodman, HMThe EMBO journal 7(4), 893-898
222022DNA-free CRISPR-Cas9 gene editing of wild tetraploid tomato Solanum peruvianum using protoplast regenerationChoun-Sea Lin ; Chen-Tran Hsu; Yu-Hsuan Yuan; Po-Xing Zheng; Fu-Hui Wu; Qiao-Wei Cheng; Yu-Lin Wu; Ting-Li Wu; Steven Lin ; Jin-Jun Yue; Ying-Huey Cheng; Shu-I Lin; Ming-Che Shih ; Jen Sheen; Yao-Cheng Lin PLANT PHYSIOLOGY 188(4), 1917-1930
231993Effects of blue and red light on expression of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase of Arabidopsis thaliana.Dewdney, J; Conley, TR; Shih, MC ; Goodman, HMPlant physiology 103(4), 1115-1121
241995Effects of light and chloroplast functional state on expression of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in long hypocotyl (hy) mutants and wild-type Arabidopsis thaliana.Conley, TR; Shih, MC Plant physiology 108(3), 1013-1022
252021Efficient and Economical Targeted Insertion in Plant Genomes via Protoplast RegenerationHsu, Chen-Tran; Yuan, Yu-Hsuan; Lin, Yao-Cheng ; Lin, Steven ; Cheng, Qiao-Wei; Wu, Fu-Hui; Sheen, Jen; Shih, Ming-Che ; Lin, Choun-Sea The CRISPR Journal 4(5), 752-760
262019Energy and sugar signaling during hypoxia.Cho, HY; Loreti, E; Shih, MC ; Perata, PThe New phytologist Early View
272019Environmental biosafety assessment on transgenic Oncidium orchid modified by RNA interference of Phytoene Synthase genesKo, Swee-Suak ; Liu, Yao-Chung; Chung, Mei-Chu ; Shih, Ming-Che ; Mohammadmehdi, Habibi; Oguchi, Taichi; Watanabe, Kazuo N.; Yeh, Kai-WunPlant Biotechnology 36(3), 181-185
282022Ethylene modulates translation dynamics in Arabidopsis under submergence via GCN2 and EIN2Cho, Hsing-Yi; Chou, Mei-Yi; Ho, Hsiu-Yin; Chen, Wan-Chieh; Shih, Ming-Che Science Advances 8(22), eabm7863
292016Ethylene-Regulated Glutamate Dehydrogenase Fine-Tunes Metabolism during Anoxia-Reoxygenation.Tsai, KJ; Lin, CY; Ting, CY; Shih, MC Plant physiology 172(3), 1548-1562
302022Evaluation of the Antifungal Activities of Photorhabdus akhurstii and Its Secondary Metabolites against Phytopathogenic Colletotrichum gloeosporioidesTu, Po-Wen; Chiu, Jie-Siang; Lin, Chih; Chien, Chih-Cheng; Hsieh, Feng-Chia; Shih, Ming-Che ; Yang, Yu-Liang Journal of Fungi 8(4), 403
311986Evidence in favor of the symbiotic origin of chloroplasts: primary structure and evolution of tobacco glyceraldehyde-3-phosphate dehydrogenases.Shih, MC ; Lazar, G; Goodman, HMCell 47(1), 73-80
322007Expression evolution in yeast genes of single-input modules is mainly due to changes in trans-acting factorsWang, D. ; Sung, H. M.; Wan, T. Y.; Huang, C. J.; Yang, P.; Chang, T.; Wang, Y. C.; Tseng, D. L.; Wu, J. P.; Lee, T. C.; Shih, M. C. ; Li, W. H. Genome Research 17, 1161-1169
332011Functional characterization of cellulases identified from the cow rumen fungus Neocallimastix patriciarum W5 by transcriptomic and secretomic analysesWang, TY ; Chen, HL; Lu, MY ; Chen, YC; Sung, HM; Mao, CT; Cho, HY; Ke, HM; Hwa, TY; Ruan, SK; Hung, KY; Chen, CK; Li, JY; Wu, YC; Chen, YH; Chou, SP; Tsai, YW; Chu, TC; Shih, CC ; Li, WH ; Shih, MC Biotechnology for biofuels 4, 24
342004Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 1.Xu, Z; Escamilla-Trevino, L; Zeng, L; Lalgondar, M; Bevan, D; Winkel, B; Mohamed, A; Cheng, CL; Shih, MC ; Poulton, J; Esen, APlant molecular biology 55(3), 343-67
352007Functional genomic analysis of Arabidopsis thaliana glycoside hydrolase family 35Ahn, YO; Zheng, M; Bevan, DR; Esen, A; Shiu, SH; Benson, J; Peng, HP; Miller, JT; Cheng, CL; Poulton, JE; Shih, MC Phytochemistry 68(11), 1510-1520
362005Gene expression and microscopic analysis of Arabidopsis exposed to chloroacetanilide herbicides and explosive compounds. A phytoremediation approach.Mezzari, MP; Walters, K; Jelinkova, M; Shih, MC ; Just, CL; Schnoor, JLPlant physiology 138(2), 858-869
372013Global transcriptome analysis and identification of a CONSTANS-like gene family in the orchid Erycina pusillaChou, ML; Shih, MC ; Chan, MT ; Liao, SY; Hsu, CT; Haung, YT; Chen, JJ; Liao, DC; Wu, FH; Lin, CS Planta 237, 1425-1441
382023Hypoxia response protein HRM1 modulates the activity of mitochondrial electron transport chain in Arabidopsis under hypoxic stressTsai, Kuen-Jin; Suen, Der-Fen ; Shih, Ming-Che New Phytologist 239(4), 1315-1331
391994Identification of a light-responsive region of the nuclear gene encoding the B subunit of chloroplast glyceraldehyde 3-phosphate dehydrogenase from Arabidopsis thaliana.Kwon, HB; Park, SC; Peng, HP; Goodman, HM; Dewdney, J; Shih, MC Plant physiology 105(1), 357-367
401997Immunolocalization of glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis thaliana.Wang, Q.; Kuo, L.; Sjolund, R.; Shih, M-C. Protoplasma 198, 155-162
412011Insights into hypoxic systemic responses based on analyses of transcriptional regulation in ArabidopsisHsu, FC; Chou, MY; Peng, HP; Chou, SJ; Shih, MC PLoS One 6(12), e28888
422015Integrating an algal β-carotene hydroxylase gene into a designed carotenoid-biosynthesis pathway increases carotenoid production in yeastJui-Jen Chang; Caroline Thia; Hao-Yeh Lin; Hsien-Lin Liu; Feng-Ju Ho; Jiunn-Tzong Wu; Ming-Che Shih ; Wen-Hsiung Li ; Chieh-Chen HuangBioresource Technology 184, 2-8
432003Interaction of a GATA factor with cis-acting elements involved in light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis.Jeong, MJ; Shih, MC Biochemical and biophysical research communications 300(2), 555-562
441988Intron existence predated the divergence of eukaryotes and prokaryotes.Shih, MC ; Heinrich, P; Goodman, HMSCIENCE 242(4882), 1164-1166
452002Involvement of calcium in the anoxic signaling pathways of Arabidopsis thaliana.Wang, Q.; Sjolund, R.; Shih, M.-C. J. Plant Physiol. Mol. Bio. 28, 441-448
462016Involvement of type VI secretion system in secretion of iron chelator pyoverdine in Pseudomonas taiwanensisChen, WJ; Kuo, TY; Hsieh, FC; Chen, PY; Wang, CS; Shih, YL ; Lai, YM; Liu, JR; Yang, YL ; Shih, MC Scientific reports 6, 32950
471984Kinetic analysis of mutations affecting the cII activation site at the PRE promoter of bacteriophage lambda.Shih, MC ; Gussin, GNProceedings of the National Academy of Sciences of the United States of America 81(20), 6432-6436
482011Mixed culture fermentation from lignocellulosic materials using thermophilic lignocellulose-degrading anaerobes.Lin, C. -W.; Wu, C-H.; Tran, D. -T.; Shih, M. -C. ; Li, W. -H.; Wu, C. F.PROCESS BIOCHEMISTRY 46, 489-493
491999Mutations affecting induction of glycolytic and fermentative genes during germination and environmental stresses in Arabidopsis.Conley, TR; Peng, HP; Shih, MC Plant physiology 119(2), 599-608
502002Mutations affecting light regulation of nuclear genes encoding chloroplast glyceraldehyde-3-phosphate dehydrogenase in Arabidopsis.Chan, CS; Peng, HP; Shih, MC Plant physiology 130(3), 1476-86
511983Mutations affecting two different steps in transcription initiation at the phage lambda PRM promoter.Shih, MC ; Gussin, GNProceedings of the National Academy of Sciences of the United States of America 80(2), 496-500
521984Mutations that alter the DNA binding site for the bacteriophage lambda cII protein and affect the translation efficiency of the cII gene.Place, N; Fien, K; Mahoney, ME; Wulff, DL; Ho, YS; Debouck, C; Rosenberg, M; Shih, MC ; Gussin, GNJournal of molecular biology 180(4), 865-880
532015NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene lossTracey A Ruhlman; Wan-Jung Chang; Jeremy JW Chen; Yao-Ting Huang; Ming-Tsair Chan ; Jin Zhang; De-Chih Liao; John C Blazier; Xiaohua Jin; Ming-Che Shih ; Robert K Jansen; Choun-Sea Lin BMC PLANT BIOLOGY 15, 100
542012Orchidstra: an integrated Orchid functional genomics databaseSu, C. -L.; Chao, Y. -T.; Yen, S. -H.; Chen, C. -Y.; Chen, W.; Chang, Y. -C. Alex; Shih, M. -C. Plant Cell and Physiology  
552012PGASO: A synthetic biology tool for engineering a cellulolytic yeastChang, Jui-Jen; Ho, Cheng-Yu; Ho, Feng-Ju; Tsai, Tsung-Yu; Ke, Huei-Mien; Wang, Christine H-T; Chen, Hsin-Liang; Shih, Ming-Che ; Huang, Chieh-Chen; Li, Wen-Hsiung Biotechnology for Biofuels 5, 53
562001Promoter analysis of the nuclear gene encoding the chloroplast glyceraldehyde-3-phosphate dehydrogenase B subunit of Arabidopsis thaliana.Chan, CS; Guo, L; Shih, MC Plant molecular biology 46(2), 131-41
572004[Promoter specificity of LE-ACS6 gene in LE-ACS6Fan, R; Wan, XR; Zhang, WT; Wang, SF; Wang, Y; Zhu, LJ; Wang, NN; Shih, MC ; Charng, YY; Yang, SFZhi wu sheng li yu fen zi sheng wu xue xue bao = Journal of plant physiology and molecular biology 30(3), 351-8
582016Quantitative phosphoproteomics of protein kinase SnRK1 regulated protein phosphorylation in Arabidopsis under submergence.Cho, HY; Wen, TN ; Wang, YT; Shih, MC Journal of experimental botany 67(9), 2745-2760
592019Regulatory cascade involving transcriptional and N-end rule pathways in rice under submergence.Lin, CC; Chao, YT; Chen, WC; Ho, HY; Chou, MY; Li, YR; Wu, YL; Yang, HA; Hsieh, H; Lin, CS ; Wu, FH; Chou, SJ ; Jen, HC; Huang, YH; Irene, D; Wu, WJ ; Wu, JL; Gibbs, DJ; Ho, MC; Shih, MC Proceedings of the National Academy of Sciences of the United States of America 116(8), 3300-3309
601984Role of cII protein in stimulating transcription initiation at the lambda PRE promoter. Enhanced formation and stabilization of open complexes.Shih, MC ; Gussin, GNJournal of molecular biology 172(4), 489-506
612008Roles of cis- and trans-changes in the regulatory evolution of genes in the gluconeogenic pathway in yeastChang, Y. W.; Liu, F. G. R.; Yu, N.; Sung, H. M.; Yang, P.; Wang, D. ; Huang, C. J.; Shih, M. C. ; Li, W. H. Molecular biology and evolution 25(9), 1863-1875
622009Roles of Trans and Cis Variation in Yeast Intraspecies Evolution of Gene ExpressionSung, HM; Wang, TY ; Wang, D ; Huang, YS; Wu, JP; Tsai, HK ; Tzeng, J; Huang, CJ; Lee, YC; Yang, P; Hsu, J; Chang, T; Cho, CY; Weng, LC; Lee, TC; Chang, TH ; Li, WH ; Shih, MC Molecular biology and evolution 26(11), 2533-2538
632019Segmental and tandem chromosome duplications led to divergent evolution of the chalcone synthase gene family in Phalaenopsis orchids.Kuo, YT; Chao, YT; Chen, WC; Shih, MC ; Chang, SBAnnals of botany 123(1), 69-77
642001Signaling events in the hypoxic induction of alcohol dehydrogenase gene in Arabidopsis.Peng, HP; Chan, CS; Shih, MC ; Yang, SFPlant physiology 126(2), 742-749
651993Stress responses and metabolic regulation of glyceraldehyde-3-phosphate dehydrogenase genes in Arabidopsis.Yang, Y; Kwon, HB; Peng, HP; Shih, MC Plant physiology 101(1), 209-216
662023SUB1A-1 anchors a regulatory cascade for epigenetic and transcriptional controls of submergence tolerance in riceLin, CC; Lee, WJ; Zeng, CY; Chou, MY; Lin, TJ; Lin, CS ; Ho, MC ; Shih, MC PNAS nexus 2(7), pgad229
672023Sugars and sucrose transporters in pollinia of Phalaenopsis aphrodite (Orchidaceae)Sun, Wan-Ting; Cheng, Sy-Chyi ; Chao, Ya-Ting; Lin, Shu-Yao; Yang, Ting-Ting; Ho, Yi-Ping; Shih, Ming-Che ; Ko, Swee-Suak Journal of Experimental Botany 74(8), 2556-2571
682013Systematic screening of glycosylation- and trafficking-associated gene knockouts in Saccharomyces cerevisiae identifies mutants with improved heterologous exocellulase activity and host secretion.Wang, TY; Huang, CJ; Chen, HL; Ho, PC; Ke, HM; Cho, HY; Ruan, SK; Hung, KY; Wang, IL; Cai, YW; Sung, HM; Li, WH; Shih, MC BMC biotechnology 13, 71
692011The AP2/ERF transcription factor HIF1 modulates ethylene responses during hypoxia in Arabidopsis.Yang, C. -Y.; Hsu, F. -C.; Li, J. -P.; Wang, N. N.; Shih, M. -C. PLANT PHYSIOLOGY 156, 202-212
702005The GUS reporter-aided analysis of the promoter activities of Arabidopsis ACC synthase genes AtACS4, AtACS5, and AtACS7 induced by hormones and stresses.Wang, NN; Shih, MC ; Li, NJournal of experimental botany 56(413), 909-920
712015The location and translocation of ndh genes of chloroplast origin in the Orchidaceae familyLin, CS ; Chen, JJ; Huang, YT; Chan, MT ; Daniell, H; Chang, WJ; Hsu, CT; Liao, DC; Wu, FH; Lin, SY; Liao, CF; Deyholos, MK; Wong, GK; Albert, VA; Chou, ML; Chen, CY; Shih, MC Scientific reports 5, 9040
722019The SnRK1-eIFiso4G1 signaling relay regulates the translation of specific mRNAs in Arabidopsis under submergenceCho, HY; Lu, MJ ; Shih, MC New phytologist 222(1), 366-381
732005Transcription factor families have much higher expansion rates in plants than in animalsShiu, S. -H.; Shih, M-C. ; Li, W. H. Plant Physiology 139(1), 18-26
742016Transcriptome-wide analysis of the MADS-box gene family in the orchid Erycina pusilla.Lin, CS ; Hsu, CT; Liao, DC; Chang, WJ; Chou, ML; Huang, YT; Chen, JJ; Ko, SS ; Chan, MT ; Shih, MC Plant biotechnology journal 14(1), 284-298
752020Whole Genome Sequencing and Tn5-Insertion Mutagenesis of Pseudomonas taiwanensis CMS to Probe Its Antagonistic Activity Against Rice Bacterial Blight DiseaseChen, WJ; Kuo, TY; Chen, CY; Hsieh, FC; Yang, YL ; Liu, JR; Shih, MC International Journal of Molecular Sciences 21(22), 8639

 

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