| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link |
| 1 | 2011 | The impact of normalization and phylogenetic information on estimating the distance metrics for metagenomes | Su, C. H.; Tsai, H. K.; Wang, D. | | | | |
| 2 | 2014 | Role of antisense RNAs in evolution of yeast regulatory complexity | Daryi Wang ; Chih-Hsu Lin | | | | |
| 3 | 2011 | Reanalyze unassigned reads in metagenomic data using conserved gene adjacency | Weng, F.C.H.; Su, C.H.; Hsu, M.T.; Wang, T.Y.; Tsai, H.K.; Wang, D. | | | | |
| 4 | 2008 | Molecular adaptation in the opsins of Sparidae in varied photic environments | Chen, J. S. C.; Yang, H. Y.; Wang, T. Y.; Wang, C. Y.; Wang, D. | | | | |
| 5 | 2012 | Identification of activated cryptic 5’ splice sites using structure profiles and odds measure | Wang, D. ; Tsai, K. N. | | | | |
| 6 | 2010 | Gain or loss of transcription factor binding sites (TFBSs) is involved in intra-specific expression differences in yeast | Wang, T. Z.; Tsai, H. K.; Wang, C. Y.; Chou, C. T.; Swamy, K. B. S.; Wang, D. | | | | |
| 7 | 2011 | Gain and Loss of Transcription Factor Binding Sites are Common between Yeast Strains but few Contribute to Expression Variation | Wang, Chuen-Yi; Tsai, Huai-Kuang; Weng, Li-Chuan; Wang, Daryi | | | | |
| 8 | 2013 | Evolution of Cis-regulatory Elements in Yeast De Novo Genes | Wang, Daryi | | | | |
| 9 | 2011 | Evidence of association between nucleosome occupancy and the evolution of transcription factor binding sites in yeast | Swamy, K.B.S; Chu, W.Y.; Wang, C.Y.; Tsai, H.K.; Wang, D. | | | | |
| 10 | 2007 | Evidence for Positive Selection in Teleost TLR9 Gene | Chen, J. S. C.; Wang, T. Y. ; Tzeng, T. D.; Wang, C. Y.; Wang, D. | | | | |
| 11 | 2015 | Effects of host phylogeny and habitats on gut microbiomes of oriental river prawn (Macrobrachium nipponense). Society for molecular biology and evolution | Pao, Y.Y.; Wang, D. | | | | |
| 12 | 2011 | Co-expression of Neighboring Genes in the Zebrafish (Danio rerio) Genome | Weng, Li-Chuan; Tsai, Huai-Kuang; Wang, Daryi | | | | |
