Results 1-62 of 62 (Search time: 0.002 seconds).
| Issue Date | Title | Author(s) | Relation | scopus | WOS | Fulltext/Archive link | |
|---|---|---|---|---|---|---|---|
| 1 | 2024 | A Novel Adductomics Workflow Incorporating FeatureHunter Software: Rapid Detection of Nucleic Acid Modifications for Studying the Exposome | C. W. Hu; Y. J. Chang; W. H. Chang; M. S. Cooke; Y. R Chen ; M. R. Chao | ENVIRONMENTAL SCIENCE & TECHNOLOGY 58(1), 75-89 | |||
| 2 | 2023 | XCP1 cleaves Pathogenesis-related protein 1 into CAPE9 for systemic immunity in Arabidopsis | Y. L. Chen; F. W. Lin; K. T. Cheng; C. H. Chang; S. C. Hung; T. Efferth; Y. R. Chen | NATURE COMMUNICATIONS 14, 4697 | |||
| 3 | 2023 | Nucleic acid adductomics – The next generation of adductomics towards assessing environmental health risks | MS Cooke; Y. J. Chang; Y. R. Chen ; C. W. Hu; M. R. Chao | SCIENCE OF THE TOTAL ENVIRONMENT 856(Part 2), 159192 | |||
| 4 | 2022 | Mass spectrometry in the discovery of peptides involved in intercellular communication: From targeted to untargeted peptidomics approaches | K. T. Fan; C. W. Hsu; Y. R. Chen | MASS SPECTROMETRY REVIEWS Early View | |||
| 5 | 2021 | Thermally driven formation of polyphenolic carbonized nanogels with high anticoagulant activity from polysaccharides | J. Y. Mao; Unnikrishnan; B. Unnikrishnan; H. W. Chu; S. G. Harroun; Y. R. Chen ; A. T. Wu; H. T. Chang; H. J. Lin; C. C. Huang | BIOMATERIALS SCIENCE 9(13), 4679-4690 | |||
| 6 | 2021 | Is high resolution a strict requirement for mass spectrometry-based cellular DNA adductomics? | Y. J. Chang; M. S. Cooke; Y. R. Chen ; S. F. Yang; P. S. Li; C. W. Hu; M. R. Chao | CHEMOSPHERE 274, E129991 | |||
| 7 | 2021 | Quantitative Proteomics Reveals the Dynamic Regulation of the Tomato Proteome in Response to Phytophthora infestans | K. T. Fan; Y. Hsu; C. F. Yeh; C. H. Chang; W. H. Chang; Y. R. Chen | INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 22(8), 4174 | |||
| 8 | 2021 | Identification of Novel Biomarkers for Pre-diabetic Diagnosis Using a Combinational Approach | Yang, Meng-Ting; Chang, Wei-Hung; Kuo, Tien-Fen; Shen, Ming-Yi; Yang, Chu-Wen; Tien, Yin-Jing; Lai, Bun-Yueh; Chen, Yet-Ran ; Chang, Yi-Cheng ; Yang, Wen-Chin | Frontiers in Endocrinology 12, 641336 | |||
| 9 | 2020 | Integrated Hypoxia Signaling and Oxidative Stress in Developmental Neurotoxicity of Benzo[a]Pyrene in Zebrafish Embryos | Y. C. Lin; C. Y. Wu; C. H. Hu; T. W. Pai; Y. R. Chen ; W. D. Wang | Antioxidants 9(8), E731 | |||
| 10 | 2020 | Proteogenomics of Non-smoking Lung Cancer in East Asia Delineates Molecular Signatures of Pathogenesis and Progression | Yi-Ju Chen; Theodoros I Roumeliotis; Ya-Hsuan Chang; Ching-Tai Chen; Chia-Li Han; Miao-Hsia Lin; Huei-Wen Chen; Gee-Chen Chang; Yih-Leong Chang; Chen-Tu Wu; Mong-Wei Lin; Min-Shu Hsieh; Yu-Tai Wang; Yet-Ran Chen ; Inge Jonassen; Fatemeh Zamanzad Ghavidel; Ze-Shiang Lin; Kuen-Tyng Lin; Ching-Wen Chen; Pei-Yuan Sheu; Chen-Ting Hung; Ke-Chieh Huang; Hao-Chin Yang; Pei-Yi Lin; Ta-Chi Yen; Yi-Wei Lin; Jen-Hung Wang; Lovely Raghav; Chien-Yu Lin; Yan-Si Chen; Pei-Shan Wu; Chi-Ting Lai; Shao-Hsing Weng; Kang-Yi Su; Wei-Hung Chang; Pang-Yan Tsai; Ana I Robles; Henry Rodriguez; Yi-Jing Hsiao; Wen-Hsin Chang; Ting-Yi Sung ; Jin-Shing Chen; Sung-Liang Yu; Jyoti S Choudhary; Hsuan-Yu Chen ; Pan-Chyr Yang; Yu-Ju Chen | Cell 182(1), 226-244.e17 | |||
| 11 | 2020 | Transient DNMT3L Expression Reinforces Chromatin Surveillance to Halt Senescence Progression in Mouse Embryonic Fibroblast | Y. C. Y. Yu; T. Z. K. Hui; T. H. Kao; H. F. Liao; C. Y. Yang; C. C. Hou; H. T. Hsieh; J. Y. Chang; Y. T. Tsai; M. Pinskaya; K. C. Yang; Y. R. Chen ; A. Morillon; M. H. Tsai; S. P. Lin | Frontiers In Cell And Developmental Biology 8, 103 | |||
| 12 | 2020 | The role of peptides cleaved from protein precursors in eliciting plant stress reactions | Y. L. Chen; K. T. Fan; S. C. Hung; Y. R. Chen | NEW PHYTOLOGIST 225(6), 2267-2282 | |||
| 13 | 2019 | An Improved Scoring Method for the Identification of Endogenous Peptides based on the Mascot MS/MS Ion Search | Y. L. Chen; W. H. Chang; C. Y. Lee; Y. R. Chen | Analyst 144(9), 3045-3055 | |||
| 14 | 2019 | Phyto-sesquiterpene lactone deoxyelephantopin and cisplatin synergistically suppress lung metastasis of B16 melanoma in mice with reduced nephrotoxicity | Wen-Wan Chao; Ya-Wen Cheng; Yet-Ran Chen ; Shu-Hua Lee; Ching-Yi Chiou; Lie-Fen Shyur | Phytomedicine 56, 194-206 | |||
| 15 | 2019 | Application of data-independent acquisition approach to study the proteome change from early to later phases of tomato pathogenesis responses | K. T. Fan; K. H. Wang; W. H. Chang; J. C; Yang; C. F. Yeh; K. T. Cheng; S. C. Hung; Y. R. Chen | INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 20(4), E863 | |||
| 16 | 2018 | Multiple model species selection for transcriptomics analysis of non-model organisms | T. W. Pai; K. H. Li; C. H. Yang; C. H. Hu; H. J. Lin; W. D. Wang; Y. R. Chen | BMC BIOINFORMATICS 19, 284 | |||
| 17 | 2018 | Functional enrichment analysis based on long noncoding RNA associations. | Hung, KS; Hsiao, CC; Pai, TW; Hu, CH; Tzou, WS; Wang, WD; Chen, YR | BMC systems biology 12(Suppl 4), 45 | |||
| 18 | 2017 | DNA Modulates the Interaction of Genetically Engineered DNA-Binding Proteins and Gold Nanoparticles: Diagnosis of High-Risk HPV Infection. | Mao, JY; Li, HW; Wei, SC; Harroun, SG; Lee, MY; Lin, HY; Chung, CY; Hsu, CH; Chen, YR ; Lin, HJ; Huang, CC | ACS applied materials & interfaces 9(51), 44307-44315 | |||
| 19 | 2017 | Fenugreek Compound (N55) Lowers Plasma Glucose through the Enhancement of Response of Physiological Glucagon-like peptide-1. | Chou, IW; Cheng, YH; Chen, YR ; Hsieh, PC ; King, K | Scientific reports 7(1), 12265 | |||
| 20 | 2017 | Protein disulfide isomerase a4 acts as a novel regulator of cancer growth through the procaspase pathway | Kuo, T-F; Chen, T-Y; Jiang, S-T; Chen, K-W; Chiang, Y-M; Hsu, Y-J; Liu, Y-J; Chen, H-M ; Yokoyama, K K; Tsai, K-C; Yeh, H-H; Chen, Y-R ; Yang, M-T; Yang, C-Y; Yang, W-C | Oncogene 36(39), 5484-5496 | |||
| 21 | 2017 | SEPT12 phosphorylation results in loss of the septin ring/sperm annulus, defective sperm motility and poor male fertility | Y. R. Shen; H. Y. Wang; Y. C. Kuo; S. C. Shih; C. H. Hsu; Y. R. Chen ; S. R. Wu; C. Y. Wang; P. L. Kuo | PLOS GENETICS 13(3), e1006631 | |||
| 22 | 2016 | Inhibiting MDSC differentiation from bone marrow with phytochemical polyacetylenes drastically impairs tumor metastasis | Wen-Chi Wei; Sheng-Yen Lin; Chun-Wen Lan; Yu-Chen Huang; Chih-Yu Lin; Pei-Wen Hsiao; Yet-Ran Chen ; Wen-Chin Yang; Ning-Sun Yang | Scientific Reports 6, 36663 | |||
| 23 | 2016 | Urinary exposure marker discovery for toxicants using ultra-high pressure liquid chromatography coupled with Orbitrap high resolution mass spectrometry and three untargeted metabolomics approaches | J. Y. Hsu; J. F. Hsu; Y. R. Chen ; C. L. Shih; Y. S. Hsu; Y. J. Chen; S. H. Tsai; P. C. Liao | ANALYTICA CHIMICA ACTA 939, 73-83 | |||
| 24 | 2016 | Metabolic labelling of cholesteryl glucosides in Helicobacter pylori reveals how the uptake of human lipids enhances bacterial virulence | H. M. Jan; Y. C. Chen; Y. Y. Shih; Y. C. Huang; Z. Tu; A. B. Ingel; S. W. Liu; M. S. Wu; J. Gervay-Huage; K. T. Mong; Y. R. Chen ; C. H. Lin | CHEMICAL SCIENCE 7(9), 6208-6216 | |||
| 25 | 2016 | Immunogenicity of mammary tumor cells can be induced by shikonin via direct binding-interference with hnRNPA1 | Shu-Yi Yin; Thomas Efferth; Feng-Yin Jian; Yung-Hsiang Chen; Chia-I Liu; Andrew H.J. Wang; Yet-Ran Chen ; Pei-Wen Hsiao ; Ning-Sun Yang | Oncotarget 7(28), 43629-43653 | |||
| 26 | 2016 | Identification of metal species by ESI-MS/MS through release of free metals from the corresponding metal-ligand complexes | M. Tsednee; Y.-C. Huang; Y.-R. Chen ; K.-C. Yeh | Scientific Reports 6, 26785 | |||
| 27 | 2016 | Streamlined membrane proteome preparation for shotgun proteomics analysis with Triton X-100 cloud point extraction and nanodiamond solid phase extraction | M. D. Pham; T.-C. Wen; H.-C. Li; P.-H. Hsieh; Y.-R. Chen ; H.-C. Chang ; C.-C. Han | MATERIALS 9(5):385 | |||
| 28 | 2015 | ETHYLENE RESPONSE FACTOR 96 positively regulates Arabidopsis resistance to necrotrophic pathogens by direct binding to GCC elements of jasmonate – and ethylene-responsive defence genes | Catinot, J; Huang, JB; Huang, PY; Tseng, MY; Chen, YL; Gu, SY; Lo, WS ; Wang, LC; Chen, YR ; Zimmerli, L | Plant Cell and Environment 38(12), 2721-2734 | |||
| 29 | 2015 | Metabolite identification for mass spectrometry-based metabolomics using multiple types of correlated ion information. | Lynn, KS; Cheng, ML; Chen, YR ; Hsu, C; Chen, A; Lih, TM; Chang, HY; Huang, CJ; Shiao, MS; Pan, WH ; Sung, TY ; Hsu, WL | Analytical chemistry 87(4), 2143-2151 | |||
| 30 | 2015 | Application of a reconstructed omics approach to identify host proteins that interact with Odontoglossum ringspot virus capsid protein | P. C. Lin; W. C. Hu; S. C. Lee; Y. L. Chen; C. Y. Lee; Y. R. Chen ; L. Y. Liu; S. S. Lin | MOLECULAR PLANT-MICROBE INTERACTIONS EPUB | |||
| 31 | 2015 | Nonorthogonal tRNA(cys)(Amber) for protein and nascent chain labeling. | Koubek, J; Chen, YR ; Cheng, RP; Huang, JJ | RNA-A PUBLICATION OF THE RNA SOCIETY 21(9), 1672-1682 | |||
| 32 | 2015 | A salt-regulated peptide derived from the CAP superfamily protein negatively regulates salt-stress tolerance in Arabidopsis. | Chien, PS; Nam, HG; Chen, YR | JOURNAL OF EXPERIMENTAL BOTANY 66(17), 5301-5313 | |||
| 33 | 2015 | Delineation of G-Quadruplex Alkylation Sites Mediated by 3,6-Bis(1-methyl-4-vinylpyridinium iodide)carbazole-Aniline Mustard Conjugates | C. H. Chen; T. H. Hu; T. C. Huang; Y. L. Chen; Y. R. Chen ; C. C. Cheng; C. T. Chen | Chemistry A European Journal 21(48), 17379-17390 | |||
| 34 | 2015 | Development of a standardized and effect-optimized herbal extract of Wedelia chinensis for prostate cancer | Tsai, CH; Tzeng, SF; Hsieh, SC; Lin, CY; Tsai, CJ; Chen, YR ; Yang, YC; Chou, YW; Lee, MT; Hsiao, PW | PHYTOMEDICINE 22, 406 | |||
| 35 | 2015 | SEPT12 orchestrates the formation of mammalian sperm annulus by organizing core octameric complexes with other SEPT proteins | Kuo, YC; Shen, YR; Chen, HI; Lin, YH; Wang, YY; Chen, YR ; Wang, CY; Kuo, PL | JOURNAL OF CELL SCIENCE 128, 923-34 | |||
| 36 | 2014 | Multiplex Brain Proteomic Analysis Revealed the Difference in Molecular Therapeutic Effects of Tissue plasminogen activator and Buyang Huanwu Decoction on Cerebral Ischemic Stroke Mice | H. J. Chen; Y. C. Shen; Y. J Shiao; K. T. Liou; P. H. Hsieh; C. Y. Lee; Y. R. Chen ; Y. L. Lin | MOLECULAR & CELLULAR PROTEOMICS | |||
| 37 | 2014 | MSRB7 reverses oxidation of GSTF2/3 to confer tolerance of Arabidopsis thaliana to oxidative stress | Lee, S.-H.; Li, C.-W.; Koh, K.W.; Chuang, H.-Y.; Chen, Y.-R. ; Lin, C.-S.; Chan, M.-T. | JOURNAL OF EXPERIMENTAL BOTANY 65(17), 5049-5062 | |||
| 38 | 2014 | Data mining application in biomedical informatics for probing into protein stability upon double mutation | Huang, L. T.; Wu, C. C.; Lai, L. F.; Gromiha, M. M.; Wang, C. S.; Chen, Y. R. | Applied Mathematics & Information Sciences 8(1L), 125-132 | |||
| 39 | 2014 | Quantitative Peptidomics Study Reveals a Wound-Induced Peptide from PR-1 Regulates Immune Signaling in Tomato | Y. L. Chen; C. Y. Lee; K. T. Cheng; W. H. Chang; R. N. Huang; H. G. Nam; Y. R. Chen | PLANT CELL 26(10), 4135-4148 | |||
| 40 | 2014 | Signal transduction triggered by iron to induce the nuclear importation of a Myb3 transcription factor in the parasitic protozoan, Trichomonas vaginalis | H. M. Hsu; Y. Lee; P. H. Hsu; H. W. Liu; C. H. Chu; Y. W. Chou; Y. R. Chen ; S. H. Chen; J. H. Tai | JOURNAL OF BIOLOGICAL CHEMISTRY 289(42), 29334-29349 | |||
| 41 | 2013 | Deficiency of NPGPx, an oxidative stress sensor, leads to obesity in mice and human. | Chang, YC ; Yu, YH; Shew, JY; Lee, WJ; Hwang, JJ; Chen, YH ; Chen, YR ; Wei, PC; Chuang, LM; Lee, WH | EMBO molecular medicine 5(8), 1165-79 | |||
| 42 | 2013 | Pregnenolone activates CLIP-170 to promote microtubule growth and cell migration | J. H. Weng; M. R. Liang; C. H. Chen; S. K. Tong; T. C. Huang; S. P. Lee; Y. R. Chen ; C. T. Chen; B. Chung | NATURE CHEMICAL BIOLOGY 9(10), 636-642 | |||
| 43 | 2012 | Tunnel Frit: A Nonmetallic In-Capillary Frit for Nanoflow Ultra High-Performance Liquid Chromatography–Mass SpectrometryApplications | Chen, CJ; Chen, WY; Tseng, MC ; Chen, YR | Analytical chemistry 84(1), 297-303 | |||
| 44 | 2012 | UniQua: A Universal Signal Processor for MS-Based Qualitative and Quantitative Proteomics Applications. | Chang, WH; Lee, CY; Lin, CY; Chen, WY; Chen, MC; Tzou, WS; Chen, YR | Analytical chemistry DOI: 10.1021/ac302281j | |||
| 45 | 2011 | Cytoskeleton Network and Cellular Migration Modulated by Nuclear-localized Receptor Tyrosine Kinase ROR1 | Tseng, HC; Kao, HW; Ho, MR; Chen, YR ; Lin, TW; Lyu, PC; Lin, WC | Anticancer research 31(12), 4239-4249 | |||
| 46 | 2010 | Visual Indicator for Surfactant Abundance in MS-Based Membrane and General Proteomics Applications | Chen, Chao-Jung; Tseng, Mei-Chun ; Lin, Han-Jia; Lin, Ting-Wei; Chen, Yet-Ran | ANALYTICAL CHEMISTRY 82(19), 8283-8290 | |||
| 47 | 2006 | Quantitative Proteomic and Genomic Profiling Reveals Metastasis-Related Protein Expression Patterns in Gastric Cancer Cells | Chen, Yet-Ran ; Juan, Hsueh-Fen; Huang, Hsuan-Cheng; Huang, Hsin-Hung; Lee, Ya-Jung; Liao, Mei-Yueh; Tseng, Chien-Wei; Lin, Li-Ling; Chen, Jeou-Yuan ; Wang, Mei-Jung; Chen, Jenn-Han; Chen, Yu-Ju | JOURNAL OF PROTEOME RESEARCH 5(10), 2727-2742 | |||
| 48 | 2006 | Multi-Q: a fully automated tool for multiplexed protein quantitation | Lin, WT; Hung, WN; Yian, YH; Wu, KP; Han, CL; Chen, YR ; Chen, YJ ; Sung, TY; Hsu, WL | Journal of proteome research 5(9), 2328-2338 | |||
| 49 | 2005 | Design and performance of a low-flow capillary electrophoresis-electrospray-mass spectrometry interface using an emitter with dual beveled edge. | Chen, YR ; Tseng, MC ; Her, GR | Electrophoresis 26(7-8), 1376-1382 | |||
| 50 | 2004 | Quantitative proteomic analysis of metabolic regulation by copper ions in Methylococcus capsulatus (Bath) | Kao, WC; Chen, YR ; Yi, EC; Lee, H; Tian, Q; Wu, KM; Tsai, SF; Yu, SS; Chen, YJ ; Aebersold, R; Chan, SI | Journal of biological chemistry 279(49), 51554-51560 | |||
| 51 | 2004 | A low-makeup beveled tip capillary electrophoresis /electrospray ionization mass spectrometry interface for micellar electrokinetic chromatography and nonvolatile buffer capillary electrophoresis | Tseng, MC ; Chen, YR ; Her, GR | Analytical chemistry 76(21), 6306-6312 | |||
| 52 | 2004 | A beveled tip sheath liquid interface for capillary electrophoresis-electrospray ionization-mass spectrometry | Tseng, MC ; Chen, YR ; Her, GR | Electrophoresis 25(13), 2084-2089 | |||
| 53 | 2003 | A simple method for fabrication of silver-coated sheathless electrospray emitters | Chen, YR ; Her, GR | Rapid Communications in Mass Spectrometry 17(5), 437-441 | |||
| 54 | 2003 | A low-flow ce/electrospray ionization MS interface for capillary zone electrophoresis, large-volume sample stacking, and micellar electrokinetic chromatography. | Chen, YR ; Tseng, MC ; Chang, YZ; Her, GR | Analytical Chemistry 75(3), 503-508 | |||
| 55 | 2001 | Analysis of Polymer Additives by Matrix-Assisted Laser Desorption Ionization/Time of Flight Mass Spectrometer Using Delayed Extractionand Collision Induced Dissociation | Shih-Tsung Hsiao; Mei-Chun Tseng ; Yet-Ran Chen ; Guor-Rong Her | Journal of the Chinese Chemical Society 48(6A), 1017-1027 | |||
| 56 | 2001 | Sheathless Capillary Electrophoresis/Electrospray Mass Spectrometry Using a Carbon-Coated Tapered Fused-Silica Capillary with a Beveled Edge | Chang, YZ; Chen, YR ; Her, GR | Analytical chemistry 73(21), 5083-5087 | |||
| 57 | 2000 | Analysis of coptisine, berberine and palmatine in adulterated Chinese medicine by capillary electrophoresis–electrospray ion trap mass spectrometry | Chen, YR ; Wen, KC; Her, GR | Journal of Chromatography A 866(2), 273-280 | |||
| 58 | 2000 | System Peaks of Cyclodextrins in Capillary Electrophoresis | Chen, Y. R. ; Ju, D. D.; Her, G. R. | J. High Resol. Chromatogr 23, 409-412 | |||
| 59 | - | Chapter 1-3: Gas Phase Ion-Molecule Reaction | Y. R. Chen | Introduction to Mass Spectrometry | |||
| 60 | - | Chapter 4: Quantitative Analysis | Y. R. Chen | Introduction to Mass Spectrometry | |||
| 61 | - | Chapter 2: Advances in LC Separations for Proteomics | Y. R. Chen | Advanced LC-MS Applications for Proteomics | |||
| 62 | - | Chapter 1-1: Electron Impact and Chemical Ionization | Y. R. Chen | Introduction to Mass Spectrometry |
