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  1. Scholars Hub of the Academia Sinica
Academia Sinica / Division of Life Sciences / Agricultural Biotechnology Research Center

Chen, Yet-Ran

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  • 22 chen, yr
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  • 58 期刊論文/journal paper

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Results 1-58 of 58 (Search time: 0.001 seconds).

Issue DateTitleAuthor(s)RelationscopusWOSFulltext/Archive link
12004A beveled tip sheath liquid interface for capillary electrophoresis-electrospray ionization-mass spectrometryTseng, MC ; Chen, YR ; Her, GRElectrophoresis 25(13), 2084-2089
22003A low-flow ce/electrospray ionization MS interface for capillary zone electrophoresis, large-volume sample stacking, and micellar electrokinetic chromatography.Chen, YR ; Tseng, MC ; Chang, YZ; Her, GRAnalytical Chemistry 75(3), 503-508
32004A low-makeup beveled tip capillary electrophoresis /electrospray ionization mass spectrometry interface for micellar electrokinetic chromatography and nonvolatile buffer capillary electrophoresisTseng, MC ; Chen, YR ; Her, GRAnalytical chemistry 76(21), 6306-6312
42024A Novel Adductomics Workflow Incorporating FeatureHunter Software: Rapid Detection of Nucleic Acid Modifications for Studying the ExposomeC. W. Hu; Y. J. Chang; W. H. Chang; M. S. Cooke; Y. R Chen ; M. R. ChaoENVIRONMENTAL SCIENCE & TECHNOLOGY 58(1), 75-89
52015A salt-regulated peptide derived from the CAP superfamily protein negatively regulates salt-stress tolerance in Arabidopsis.Chien, PS; Nam, HG; Chen, YR JOURNAL OF EXPERIMENTAL BOTANY 66(17), 5301-5313
62003A simple method for fabrication of silver-coated sheathless electrospray emittersChen, YR ; Her, GRRapid Communications in Mass Spectrometry 17(5), 437-441
72019An Improved Scoring Method for the Identification of Endogenous Peptides based on the Mascot MS/MS Ion SearchY. L. Chen; W. H. Chang; C. Y. Lee; Y. R. Chen Analyst 144(9), 3045-3055
82000Analysis of coptisine, berberine and palmatine in adulterated Chinese medicine by capillary electrophoresis–electrospray ion trap mass spectrometryChen, YR ; Wen, KC; Her, GRJournal of Chromatography A 866(2), 273-280
92001Analysis of Polymer Additives by Matrix-Assisted Laser Desorption Ionization/Time of Flight Mass Spectrometer Using Delayed Extractionand Collision Induced DissociationShih-Tsung Hsiao; Mei-Chun Tseng ; Yet-Ran Chen ; Guor-Rong HerJournal of the Chinese Chemical Society 48(6A), 1017-1027
102015Application of a reconstructed omics approach to identify host proteins that interact with Odontoglossum ringspot virus capsid proteinP. C. Lin; W. C. Hu; S. C. Lee; Y. L. Chen; C. Y. Lee; Y. R. Chen ; L. Y. Liu; S. S. LinMOLECULAR PLANT-MICROBE INTERACTIONS EPUB
112019Application of data-independent acquisition approach to study the proteome change from early to later phases of tomato pathogenesis responsesK. T. Fan; K. H. Wang; W. H. Chang; J. C; Yang; C. F. Yeh; K. T. Cheng; S. C. Hung; Y. R. Chen INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 20(4), E863
122011Cytoskeleton Network and Cellular Migration Modulated by Nuclear-localized Receptor Tyrosine Kinase ROR1Tseng, HC; Kao, HW; Ho, MR; Chen, YR ; Lin, TW; Lyu, PC; Lin, WC Anticancer research 31(12), 4239-4249
132014Data mining application in biomedical informatics for probing into protein stability upon double mutationHuang, L. T.; Wu, C. C.; Lai, L. F.; Gromiha, M. M.; Wang, C. S.; Chen, Y. R. Applied Mathematics & Information Sciences 8(1L), 125-132
142013Deficiency of NPGPx, an oxidative stress sensor, leads to obesity in mice and human.Chang, YC ; Yu, YH; Shew, JY; Lee, WJ; Hwang, JJ; Chen, YH ; Chen, YR ; Wei, PC; Chuang, LM; Lee, WHEMBO molecular medicine 5(8), 1165-79
152015Delineation of G-Quadruplex Alkylation Sites Mediated by 3,6-Bis(1-methyl-4-vinylpyridinium iodide)carbazole-Aniline Mustard ConjugatesC. H. Chen; T. H. Hu; T. C. Huang; Y. L. Chen; Y. R. Chen ; C. C. Cheng; C. T. ChenChemistry A European Journal 21(48), 17379-17390
162005Design and performance of a low-flow capillary electrophoresis-electrospray-mass spectrometry interface using an emitter with dual beveled edge.Chen, YR ; Tseng, MC ; Her, GRElectrophoresis 26(7-8), 1376-1382
172015Development of a standardized and effect-optimized herbal extract of Wedelia chinensis for prostate cancerTsai, CH; Tzeng, SF; Hsieh, SC; Lin, CY; Tsai, CJ; Chen, YR ; Yang, YC; Chou, YW; Lee, MT; Hsiao, PWPHYTOMEDICINE 22, 406
182017DNA Modulates the Interaction of Genetically Engineered DNA-Binding Proteins and Gold Nanoparticles: Diagnosis of High-Risk HPV Infection.Mao, JY; Li, HW; Wei, SC; Harroun, SG; Lee, MY; Lin, HY; Chung, CY; Hsu, CH; Chen, YR ; Lin, HJ; Huang, CCACS applied materials & interfaces 9(51), 44307-44315
192015ETHYLENE RESPONSE FACTOR 96 positively regulates Arabidopsis resistance to necrotrophic pathogens by direct binding to GCC elements of jasmonate – and ethylene-responsive defence genesCatinot, J; Huang, JB; Huang, PY; Tseng, MY; Chen, YL; Gu, SY; Lo, WS ; Wang, LC; Chen, YR ; Zimmerli, LPlant Cell and Environment 38(12), 2721-2734
202017Fenugreek Compound (N55) Lowers Plasma Glucose through the Enhancement of Response of Physiological Glucagon-like peptide-1.Chou, IW; Cheng, YH; Chen, YR ; Hsieh, PC ; King, KScientific reports 7(1), 12265
212018Functional enrichment analysis based on long noncoding RNA associations.Hung, KS; Hsiao, CC; Pai, TW; Hu, CH; Tzou, WS; Wang, WD; Chen, YR BMC systems biology 12(Suppl 4), 45
222016Identification of metal species by ESI-MS/MS through release of free metals from the corresponding metal-ligand complexesM. Tsednee; Y.-C. Huang; Y.-R. Chen ; K.-C. Yeh Scientific Reports 6, 26785
232021Identification of Novel Biomarkers for Pre-diabetic Diagnosis Using a Combinational ApproachYang, Meng-Ting; Chang, Wei-Hung; Kuo, Tien-Fen; Shen, Ming-Yi; Yang, Chu-Wen; Tien, Yin-Jing; Lai, Bun-Yueh; Chen, Yet-Ran ; Chang, Yi-Cheng ; Yang, Wen-Chin Frontiers in Endocrinology 12, 641336
242016Immunogenicity of mammary tumor cells can be induced by shikonin via direct binding-interference with hnRNPA1Shu-Yi Yin; Thomas Efferth; Feng-Yin Jian; Yung-Hsiang Chen; Chia-I Liu; Andrew H.J. Wang; Yet-Ran Chen ; Pei-Wen Hsiao ; Ning-Sun Yang Oncotarget 7(28), 43629-43653
252016Inhibiting MDSC differentiation from bone marrow with phytochemical polyacetylenes drastically impairs tumor metastasisWen-Chi Wei; Sheng-Yen Lin; Chun-Wen Lan; Yu-Chen Huang; Chih-Yu Lin; Pei-Wen Hsiao; Yet-Ran Chen ; Wen-Chin Yang; Ning-Sun Yang Scientific Reports 6, 36663
262020Integrated Hypoxia Signaling and Oxidative Stress in Developmental Neurotoxicity of Benzo[a]Pyrene in Zebrafish EmbryosY. C. Lin; C. Y. Wu; C. H. Hu; T. W. Pai; Y. R. Chen ; W. D. WangAntioxidants 9(8), E731
272021Is high resolution a strict requirement for mass spectrometry-based cellular DNA adductomics?Y. J. Chang; M. S. Cooke; Y. R. Chen ; S. F. Yang; P. S. Li; C. W. Hu; M. R. ChaoCHEMOSPHERE 274, E129991
282022Mass spectrometry in the discovery of peptides involved in intercellular communication: From targeted to untargeted peptidomics approachesK. T. Fan; C. W. Hsu; Y. R. Chen MASS SPECTROMETRY REVIEWS Early View
292016Metabolic labelling of cholesteryl glucosides in Helicobacter pylori reveals how the uptake of human lipids enhances bacterial virulenceH. M. Jan; Y. C. Chen; Y. Y. Shih; Y. C. Huang; Z. Tu; A. B. Ingel; S. W. Liu; M. S. Wu; J. Gervay-Huage; K. T. Mong; Y. R. Chen ; C. H. LinCHEMICAL SCIENCE 7(9), 6208-6216
302015Metabolite identification for mass spectrometry-based metabolomics using multiple types of correlated ion information.Lynn, KS; Cheng, ML; Chen, YR ; Hsu, C; Chen, A; Lih, TM; Chang, HY; Huang, CJ; Shiao, MS; Pan, WH ; Sung, TY ; Hsu, WL Analytical chemistry 87(4), 2143-2151
312014MSRB7 reverses oxidation of GSTF2/3 to confer tolerance of Arabidopsis thaliana to oxidative stressLee, S.-H.; Li, C.-W.; Koh, K.W.; Chuang, H.-Y.; Chen, Y.-R. ; Lin, C.-S.; Chan, M.-T. JOURNAL OF EXPERIMENTAL BOTANY 65(17), 5049-5062
322006Multi-Q: a fully automated tool for multiplexed protein quantitationLin, WT; Hung, WN; Yian, YH; Wu, KP; Han, CL; Chen, YR ; Chen, YJ ; Sung, TY; Hsu, WLJournal of proteome research 5(9), 2328-2338
332018Multiple model species selection for transcriptomics analysis of non-model organismsT. W. Pai; K. H. Li; C. H. Yang; C. H. Hu; H. J. Lin; W. D. Wang; Y. R. Chen BMC BIOINFORMATICS 19, 284
342014Multiplex Brain Proteomic Analysis Revealed the Difference in Molecular Therapeutic Effects of Tissue plasminogen activator and Buyang Huanwu Decoction on Cerebral Ischemic Stroke MiceH. J. Chen; Y. C. Shen; Y. J Shiao; K. T. Liou; P. H. Hsieh; C. Y. Lee; Y. R. Chen ; Y. L. LinMOLECULAR & CELLULAR PROTEOMICS
352015Nonorthogonal tRNA(cys)(Amber) for protein and nascent chain labeling.Koubek, J; Chen, YR ; Cheng, RP; Huang, JJRNA-A PUBLICATION OF THE RNA SOCIETY 21(9), 1672-1682
362023Nucleic acid adductomics – The next generation of adductomics towards assessing environmental health risksMS Cooke; Y. J. Chang; Y. R. Chen ; C. W. Hu; M. R. ChaoSCIENCE OF THE TOTAL ENVIRONMENT 856(Part 2), 159192
372019Phyto-sesquiterpene lactone deoxyelephantopin and cisplatin synergistically suppress lung metastasis of B16 melanoma in mice with reduced nephrotoxicityWen-Wan Chao; Ya-Wen Cheng; Yet-Ran Chen ; Shu-Hua Lee; Ching-Yi Chiou; Lie-Fen Shyur Phytomedicine 56, 194-206
382013Pregnenolone activates CLIP-170 to promote microtubule growth and cell migrationJ. H. Weng; M. R. Liang; C. H. Chen; S. K. Tong; T. C. Huang; S. P. Lee; Y. R. Chen ; C. T. Chen; B. ChungNATURE CHEMICAL BIOLOGY 9(10), 636-642
392017Protein disulfide isomerase a4 acts as a novel regulator of cancer growth through the procaspase pathwayKuo, T-F; Chen, T-Y; Jiang, S-T; Chen, K-W; Chiang, Y-M; Hsu, Y-J; Liu, Y-J; Chen, H-M ; Yokoyama, K K; Tsai, K-C; Yeh, H-H; Chen, Y-R ; Yang, M-T; Yang, C-Y; Yang, W-C Oncogene 36(39), 5484-5496
402020Proteogenomics of Non-smoking Lung Cancer in East Asia Delineates Molecular Signatures of Pathogenesis and ProgressionYi-Ju Chen; Theodoros I Roumeliotis; Ya-Hsuan Chang; Ching-Tai Chen; Chia-Li Han; Miao-Hsia Lin; Huei-Wen Chen; Gee-Chen Chang; Yih-Leong Chang; Chen-Tu Wu; Mong-Wei Lin; Min-Shu Hsieh; Yu-Tai Wang; Yet-Ran Chen ; Inge Jonassen; Fatemeh Zamanzad Ghavidel; Ze-Shiang Lin; Kuen-Tyng Lin; Ching-Wen Chen; Pei-Yuan Sheu; Chen-Ting Hung; Ke-Chieh Huang; Hao-Chin Yang; Pei-Yi Lin; Ta-Chi Yen; Yi-Wei Lin; Jen-Hung Wang; Lovely Raghav; Chien-Yu Lin; Yan-Si Chen; Pei-Shan Wu; Chi-Ting Lai; Shao-Hsing Weng; Kang-Yi Su; Wei-Hung Chang; Pang-Yan Tsai; Ana I Robles; Henry Rodriguez; Yi-Jing Hsiao; Wen-Hsin Chang; Ting-Yi Sung ; Jin-Shing Chen; Sung-Liang Yu; Jyoti S Choudhary; Hsuan-Yu Chen ; Pan-Chyr Yang; Yu-Ju Chen Cell 182(1), 226-244.e17
412014Quantitative Peptidomics Study Reveals a Wound-Induced Peptide from PR-1 Regulates Immune Signaling in TomatoY. L. Chen; C. Y. Lee; K. T. Cheng; W. H. Chang; R. N. Huang; H. G. Nam; Y. R. Chen PLANT CELL 26(10), 4135-4148
422004Quantitative proteomic analysis of metabolic regulation by copper ions in Methylococcus capsulatus (Bath)Kao, WC; Chen, YR ; Yi, EC; Lee, H; Tian, Q; Wu, KM; Tsai, SF; Yu, SS; Chen, YJ ; Aebersold, R; Chan, SIJournal of biological chemistry 279(49), 51554-51560
432006Quantitative Proteomic and Genomic Profiling Reveals Metastasis-Related Protein Expression Patterns in Gastric Cancer CellsChen, Yet-Ran ; Juan, Hsueh-Fen; Huang, Hsuan-Cheng; Huang, Hsin-Hung; Lee, Ya-Jung; Liao, Mei-Yueh; Tseng, Chien-Wei; Lin, Li-Ling; Chen, Jeou-Yuan ; Wang, Mei-Jung; Chen, Jenn-Han; Chen, Yu-Ju JOURNAL OF PROTEOME RESEARCH 5(10), 2727-2742
442021Quantitative Proteomics Reveals the Dynamic Regulation of the Tomato Proteome in Response to Phytophthora infestansK. T. Fan; Y. Hsu; C. F. Yeh; C. H. Chang; W. H. Chang; Y. R. Chen INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 22(8), 4174
452015SEPT12 orchestrates the formation of mammalian sperm annulus by organizing core octameric complexes with other SEPT proteinsKuo, YC; Shen, YR; Chen, HI; Lin, YH; Wang, YY; Chen, YR ; Wang, CY; Kuo, PLJOURNAL OF CELL SCIENCE 128, 923-34
462017SEPT12 phosphorylation results in loss of the septin ring/sperm annulus, defective sperm motility and poor male fertilityY. R. Shen; H. Y. Wang; Y. C. Kuo; S. C. Shih; C. H. Hsu; Y. R. Chen ; S. R. Wu; C. Y. Wang; P. L. KuoPLOS GENETICS 13(3), e1006631
472001Sheathless Capillary Electrophoresis/Electrospray Mass Spectrometry Using a Carbon-Coated Tapered Fused-Silica Capillary with a Beveled EdgeChang, YZ; Chen, YR ; Her, GRAnalytical chemistry 73(21), 5083-5087
482014Signal transduction triggered by iron to induce the nuclear importation of a Myb3 transcription factor in the parasitic protozoan, Trichomonas vaginalisH. M. Hsu; Y. Lee; P. H. Hsu; H. W. Liu; C. H. Chu; Y. W. Chou; Y. R. Chen ; S. H. Chen; J. H. TaiJOURNAL OF BIOLOGICAL CHEMISTRY 289(42), 29334-29349
492016Streamlined membrane proteome preparation for shotgun proteomics analysis with Triton X-100 cloud point extraction and nanodiamond solid phase extractionM. D. Pham; T.-C. Wen; H.-C. Li; P.-H. Hsieh; Y.-R. Chen ; H.-C. Chang ; C.-C. Han MATERIALS 9(5):385
502000System Peaks of Cyclodextrins in Capillary ElectrophoresisChen, Y. R. ; Ju, D. D.; Her, G. R.J. High Resol. Chromatogr 23, 409-412
512020The role of peptides cleaved from protein precursors in eliciting plant stress reactionsY. L. Chen; K. T. Fan; S. C. Hung; Y. R. Chen NEW PHYTOLOGIST 225(6), 2267-2282
522021Thermally driven formation of polyphenolic carbonized nanogels with high anticoagulant activity from polysaccharidesJ. Y. Mao; Unnikrishnan; B. Unnikrishnan; H. W. Chu; S. G. Harroun; Y. R. Chen ; A. T. Wu; H. T. Chang; H. J. Lin; C. C. HuangBIOMATERIALS SCIENCE 9(13), 4679-4690
532020Transient DNMT3L Expression Reinforces Chromatin Surveillance to Halt Senescence Progression in Mouse Embryonic FibroblastY. C. Y. Yu; T. Z. K. Hui; T. H. Kao; H. F. Liao; C. Y. Yang; C. C. Hou; H. T. Hsieh; J. Y. Chang; Y. T. Tsai; M. Pinskaya; K. C. Yang; Y. R. Chen ; A. Morillon; M. H. Tsai; S. P. LinFrontiers In Cell And Developmental Biology 8, 103
542012Tunnel Frit: A Nonmetallic In-Capillary Frit for Nanoflow Ultra High-Performance Liquid Chromatography–Mass SpectrometryApplicationsChen, CJ; Chen, WY; Tseng, MC ; Chen, YR Analytical chemistry 84(1), 297-303
552012UniQua: A Universal Signal Processor for MS-Based Qualitative and Quantitative Proteomics Applications.Chang, WH; Lee, CY; Lin, CY; Chen, WY; Chen, MC; Tzou, WS; Chen, YR Analytical chemistry DOI: 10.1021/ac302281j
562016Urinary exposure marker discovery for toxicants using ultra-high pressure liquid chromatography coupled with Orbitrap high resolution mass spectrometry and three untargeted metabolomics approachesJ. Y. Hsu; J. F. Hsu; Y. R. Chen ; C. L. Shih; Y. S. Hsu; Y. J. Chen; S. H. Tsai; P. C. LiaoANALYTICA CHIMICA ACTA 939, 73-83
572010Visual Indicator for Surfactant Abundance in MS-Based Membrane and General Proteomics ApplicationsChen, Chao-Jung; Tseng, Mei-Chun ; Lin, Han-Jia; Lin, Ting-Wei; Chen, Yet-Ran ANALYTICAL CHEMISTRY 82(19), 8283-8290
582023XCP1 cleaves Pathogenesis-related protein 1 into CAPE9 for systemic immunity in ArabidopsisY. L. Chen; F. W. Lin; K. T. Cheng; C. H. Chang; S. C. Hung; T. Efferth; Y. R. Chen NATURE COMMUNICATIONS 14, 4697

 

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